| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2103888 = | 0 (0.000) | 47 (0.470) | 29/96 | 3.6 | 95.0% | coding (155/216 nt) | ECB_01992 | hypothetical protein |
| ? | REL606 | = 2103891 | 5 (0.050) | coding (158/216 nt) | ECB_01992 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACT > REL606/2103816‑2103965 | gctctacaatgaaaactgcttcgttattgacttcgaatataaaggggcgaaatttgcattagatttaacagccag‑c > 2:263999‑M2/73‑76 (MQ=255)gctatacaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑c > 1:1173363‑M2/73‑76 (MQ=255) ctatacaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑cc < 1:2708202‑M2/5‑1 (MQ=255) tatacaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑cca < 2:2912870‑M2/6‑1 (MQ=255) tatacaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑cca < 2:1092947‑M2/6‑1 (MQ=255) tatacaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑cca > 1:3147667‑M2/71‑76 (MQ=255) atacaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccag > 1:3792428‑M2/70‑76 (MQ=255) atacaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccag < 1:2225924‑M2/7‑1 (MQ=255) tacaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagc > 1:605190‑M2/69‑76 (MQ=255) acaatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagcc > 2:3770940‑M2/68‑76 (MQ=255) caatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagcca > 2:3069000‑M2/67‑76 (MQ=255) aatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccag < 1:1652890‑M2/11‑1 (MQ=255) aatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccag > 1:3086476‑M2/66‑76 (MQ=255) aatgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagcaag‑ccagccag > 1:2209080‑M2/66‑76 (MQ=255) atgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagc > 2:3073690‑M2/65‑76 (MQ=255) tgaaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagcc < 2:3585824‑M2/13‑1 (MQ=255) aaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccag > 2:2747000‑M2/62‑76 (MQ=255) aaaactgcttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccag < 1:3734313‑M2/15‑1 (MQ=255) aaaactgcttcgttattgacttcgaatataaaggggtaaaatttgcattagatttcacagccag‑ccagccagccag < 2:4484947‑M2/15‑1 (MQ=255) actgcttcgttattgacttcgaatataaaggggtgaaatttgcattagttttcacagccag‑ccagccagccagcca < 1:2372481‑M2/18‑1 (MQ=255) cttctttattgacttcgaataaaagggggtgaattttgcattaaatttcacagccag‑ccagccagccagccagcca < 1:1018141‑M2/22‑1 (MQ=255) cttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagcca < 1:844290‑M2/22‑1 (MQ=255) cttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagcca < 1:5029547‑M2/22‑1 (MQ=255) cttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagcca > 1:4830421‑M2/55‑76 (MQ=255) ttcgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagccag > 1:2729740‑M2/54‑76 (MQ=255) cgttattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagccagcc > 1:58030‑M2/52‑76 (MQ=255) tattgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagccagccagc > 1:435941‑M2/49‑76 (MQ=255) attgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagccagccagcc > 1:417156‑M2/48‑76 (MQ=255) attgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagccagccagcc > 1:2911690‑M2/48‑76 (MQ=255) ttgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagccagccagcca > 1:4016823‑M2/47‑76 (MQ=255) tgacttcgaatataaaggggtgaaatttgcattagatttcacagccag‑ccagccagccagccagccagccagacag > 1:1794287‑M2/46‑76 (MQ=255) acttcgaatataaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGgt > 2:230450‑M2/44‑76 (MQ=255) cttcgaatataaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGgtg > 2:513781‑M2/43‑76 (MQ=255) ttcgaatataaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGgtgt > 2:3189164‑M2/42‑76 (MQ=255) tcgaatataaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGtgtg > 2:3205442‑M2/41‑76 (MQ=255) tataaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAAtgt > 2:3541791‑M2/36‑76 (MQ=255) tataaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAAtgt > 2:1437467‑M2/36‑76 (MQ=255) ataaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAAtgtg > 1:4997836‑M2/35‑76 (MQ=255) taaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTgg > 2:1443633‑M2/34‑76 (MQ=255) taaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTgg > 2:2929031‑M2/34‑76 (MQ=255) aaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGa > 2:485500‑M2/33‑76 (MQ=255) aaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGa > 1:4562360‑M2/33‑76 (MQ=255) aaaggggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGa > 1:4038823‑M2/33‑76 (MQ=255) ggtgaaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTg > 2:48304‑M2/28‑76 (MQ=255) aaatttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGAGTGAATGTTGATTTTGtact > 2:2689426‑M2/24‑76 (MQ=255) atttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGtactac > 1:4577624‑M2/22‑76 (MQ=255) tttgcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACg > 2:3498552‑M2/21‑76 (MQ=255) gcattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGaaa > 1:2942993‑M2/18‑76 (MQ=255) cattagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaat > 1:699995‑M2/17‑76 (MQ=255) attagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaata > 2:1512808‑M2/16‑76 (MQ=255) ttagatttccccgcCCGCCCACCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaata < 1:1833604‑M2/62‑1 (MQ=255) ttagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaataa > 2:4860394‑M2/15‑76 (MQ=255) ttagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaataa > 1:1876437‑M2/15‑76 (MQ=255) ttagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaataa > 2:2700662‑M2/15‑76 (MQ=255) ttagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaataa > 2:1500322‑M2/15‑76 (MQ=255) taaatttcacagccCAC‑CCAGCCGGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaataa < 2:2866140‑M2/62‑1 (MQ=255) tagatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAaataat > 1:3512633‑M2/14‑76 (MQ=255) agatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAAtt > 2:477989‑M2/13‑76 (MQ=255) agatttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAAtt > 1:3992364‑M2/13‑76 (MQ=255) tttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGcc > 1:1319238‑M2/10‑76 (MQ=255) ttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGCAATAATTGccc > 1:3673894‑M2/9‑76 (MQ=255) ttcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGccc > 2:3628738‑M2/9‑76 (MQ=255) tcacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCt > 1:1798588‑M2/8‑76 (MQ=255) cacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCtt > 1:4363621‑M2/7‑76 (MQ=255) cacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCtt > 1:3271580‑M2/7‑76 (MQ=255) cacagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCtt > 1:2375925‑M2/7‑76 (MQ=255) cacaccCAC‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCtt < 2:5123620‑M2/70‑1 (MQ=255) acagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCtta > 2:4464927‑M2/6‑76 (MQ=255) acagcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCtta > 2:482685‑M2/6‑76 (MQ=255) agcCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCttatt > 2:3197661‑M2/4‑76 (MQ=255) ccCAC‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCttatta < 1:2554879‑M2/74‑1 (MQ=255) cCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTtattat > 1:3868447‑M2/2‑76 (MQ=255) cCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTtattat > 1:1704249‑M2/2‑76 (MQ=255) cag‑ccagccagccagccagccagccagcCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATtata > 2:228022/1‑76 (MQ=255) cgcccacccagccagccagccagccagccagGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATtata < 2:3108631/73‑1 (MQ=255) ag‑ccagccagccagccagccagccagccAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATAc > 1:3523164/1‑76 (MQ=255) ag‑ccagccagccagccagccagccagccAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATAc > 2:4331466/1‑76 (MQ=255) g‑cccgcgagccagccagccagccagccaGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACt < 2:780072/76‑1 (MQ=255) | CATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAATTTGCATTAGATTTCACAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTATACT > REL606/2103816‑2103965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |