Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | REL606 | 2,009,951 | (GCA)3→2 | intergenic (‑81/+23) | yeeX ← / ← yeeA | hypothetical protein/conserved inner membrane protein |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 2009944 | 2009946 | 3 | 11 [0] | [0] 12 | yeeX/yeeA | hypothetical protein/conserved inner membrane protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2009947 = | 0 (0.000) | 10 (0.510) | 10/136 | 0.9 | 100% | intergenic (‑77/+29) | yeeX/yeeA | hypothetical protein/conserved inner membrane protein |
? | REL606 | = 2009943 | 0 (0.000) | intergenic (‑73/+33) | yeeX/yeeA | hypothetical protein/conserved inner membrane protein |
AGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCAAGCT > REL606/2009878‑2010022 | catagctgccgcagatgacaatgcttttatcccttttcactatcataccctttatccttgctgaatcgaAgcagca < 1:331373‑M1/7‑1 (MQ=255) tagctgccgcagatgacaatgcttttatcccttttcactatcataccctttatccttgctgaatcgaAGCAGCAAg > 1:193092‑M1/68‑76 (MQ=255) atgcttttatcccttttcactatcataccctttatccttgctgaatcgaAGCAGCAAGATGATTCTGAAGTTCAgg > 1:592929‑M1/50‑76 (MQ=255) tttcactatcataccctttatccttgctgaatcgaAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCaa > 2:29625‑M1/36‑76 (MQ=255) cataccctttatccttgctgaatcgaAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCa > 1:664224‑M1/27‑76 (MQ=255) taccctttatccttgctgaatcgaAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCaaa < 2:566191‑M1/52‑1 (MQ=255) tatccttgctgaatcgaAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGAtt < 2:239502‑M1/59‑1 (MQ=255) tccttgctgaatcgaAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCg > 1:4803‑M1/16‑76 (MQ=255) ttgctgaatcgaAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATa < 1:154598‑M1/64‑1 (MQ=255) tcgaAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCa < 1:642182‑M1/72‑1 (MQ=255) aAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCAAGc < 1:666212‑M1/75‑1 (MQ=255) AGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCAAGCt > 2:136149‑M1/1‑76 (MQ=255) | AGCTGCCGCAGATGACAATGCTTTTATCCCTTTTCACTATCATACCCTTTATCCTTGCTGAATCGAAGCAGCAGCAAGATGATTCTGAAGTTCAGGAATTATTTGCGCAAGGCCCGGCAAATCAGATTCGATAGCAACTCAAGCT > REL606/2009878‑2010022 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |