| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2775877 | NA (NA) | 38 (1.030) | 32/146 | 0.2 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3015771 = | 0 (0.000) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
| * | ? | REL606 | = 3015773 | 0 (0.000) | 40 (1.070) | 23/148 | 0.7 | 100% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
GCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2775800‑2775877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTTGTG > REL606/3015771‑3015845 gtTTTTCAAAAGGGT‑TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 2:1079422/74‑1 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 1:656897/76‑1 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:459214/1‑76 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 2:549884/1‑76 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC > 1:787511/1‑76 CTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTAC < 2:319599/76‑1 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 2:98430/1‑76 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 2:1148566/76‑1 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:195294/76‑1 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTT > 1:652608/1‑76 AAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTC > 2:950170/1‑76 AAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCT < 1:1085495/76‑1 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCC < 2:241304/76‑1 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCC < 2:471764/76‑1 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCC < 1:773667/76‑1 GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCC > 1:980922/1‑76 GGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCC > 1:1048474/1‑76 TATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAG > 2:735964/1‑76 TTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCAT > 2:980317/1‑76 TTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACC > 1:377816/1‑76 GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAA > 1:636529/1‑76 ACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAG > 2:3262/1‑76 TATTAGGGGCTATTCCATTTAATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAG > 1:112073/1‑76 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAA > 1:574251/1‑76 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAA < 1:1004688/76‑1 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAA < 1:2378/76‑1 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC > 1:1062902/1‑76 AGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGC > 2:760901/1‑76 ATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTG < 2:1073330/76‑1 ATTTCATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAAT > 1:728408/1‑76 ATCGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGG < 1:592867/76‑1 CGTCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAG < 1:1073332/76‑1 TCCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGC < 2:53411/76‑1 CCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCA > 2:239095/1‑76 CCAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCA < 1:273639/76‑1 CAACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCAC < 2:574863/76‑1 AACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACA < 1:446582/76‑1 ACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAA < 2:549521/76‑1 ACAAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAA < 2:177544/76‑1 AAAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACT > 1:383624/1‑76 AAATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTG > 2:500741/1‑76 ATGGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGAT < 2:601960/76‑1 GGGTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCA > 1:877576/1‑76 GTGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGC > 2:651234/1‑76 TGCAGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCC > 1:162203/1‑76 AGTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCT < 1:834064/76‑1 GTACACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCACCCGCTT > 1:689223/1‑76 ACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTTGTG > 1:957052/1‑76 ACTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTTGTG > 1:167483/1‑76 GCTTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2775800‑2775877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caCTTTCTGCCCAGTCATCCACCAAAGAAGAAGCCAGCCTGCGAATGCAGGAGGCACAACTGATCAGCCGCTTTGTG > REL606/3015771‑3015845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |