| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,015,771 | IS150 (–) +3 bp | coding (1192‑1194/1677 nt) | ECB_02816 → | KpsD protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2775877 | NA (NA) | 38 (1.030) | 32/146 | 0.2 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3015771 = | 0 (0.000) | coding (1192/1677 nt) | ECB_02816 | KpsD protein | |||||
| * | ? | REL606 | = 3015773 | 0 (0.000) | 40 (1.070) | 23/148 | 0.7 | 100% | coding (1194/1677 nt) | ECB_02816 | KpsD protein |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
TATCGCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3015699‑3015773‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < REL606/3894996‑3894922 TATCGCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT > 1:122507/1‑76TATCGCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTT < 2:115772/76‑1 CCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTG > 1:743353/1‑76 AGCGTCAGAAAGAGATGCTGAATCTCTCGCCGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTT > 2:96693/1‑76 CAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACA < 1:268869/76‑1 AGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAG > 2:565193/1‑76 GAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAA < 1:1093830/76‑1 TGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGG > 2:459658/1‑76 ATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCAT < 1:790521/76‑1 TCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATA < 1:847691/76‑1 CTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATAT < 2:234187/76‑1 CTCGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAG < 2:757726/76‑1 CGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 2:887401/1‑76 CGCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGT > 1:777571/1‑76 GCTGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTC < 2:1104958/76‑1 TGCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTG < 2:199855/76‑1 GCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGA > 2:697557/1‑76 GCAAAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGA > 2:560811/1‑76 GCAAAAGCTGGAGGAAGCCTAACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGA > 2:887614/1‑76 AAAGCTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTC > 1:695861/1‑76 CTGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGAT > 1:836054/1‑76 TGGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATA < 1:21808/76‑1 GGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT < 1:165453/76‑1 GGAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAT > 1:886021/1‑76 GAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATAgt < 1:888722/76‑3 GAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATT < 1:1083812/76‑1 GAGGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATT < 1:888706/76‑1 GGAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCA < 1:590531/76‑1 GAAGCCTCACTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAA < 1:542380/76‑1 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA > 2:470527/1‑76 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCA > 2:470533/1‑76 CTTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCACATAGGTCTGATTCCGATATTCAATTGGAGTCA > 2:748621/1‑76 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG < 1:5233/76‑1 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG > 1:530605/1‑76 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG > 1:530612/1‑76 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG < 1:711133/76‑1 TTTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAG < 1:580183/76‑1 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA > 2:1104207/1‑76 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < 1:101957/76‑1 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA > 2:368712/1‑76 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA > 1:836109/1‑76 TTGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < 1:76050/76‑1 TATCGCCCATCAGTGGCTCAGCGTCAGAAAGAGATGCTGAATCTCTCGCTGCAAAAGCTGGAGGAAGCCTCACTTt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3015699‑3015773‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGACCCCAAAAAGTTGGACAGTTAAACACGAGGCATATAGGTCTGATTCCGATATTCAATTGGAGTCAGA < REL606/3894996‑3894922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |