| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 3,912,149 | Δ15 bp | coding (28‑42/99 nt) | ilvL → | ilvG operon leader peptide |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 3912149 | 3912163 | 15 | 46 [0] | [0] 46 | ilvL | ilvG operon leader peptide |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3912148 | 0 (0.000) | 43 (1.010) | 33/132 | 0.3 | 100% | coding (27/99 nt) | ilvL | ilvG operon leader peptide |
| ? | REL606 | 3912164 = | 0 (0.000) | coding (43/99 nt) | ilvL | ilvG operon leader peptide | |||||
CAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3912065‑3912148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAA > REL606/3912164‑3912238 CAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAG < 2:1162077/76‑1CAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAG > 1:794286/1‑76CAAAACCTATGGNAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAG > 1:23768/1‑76 AAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGT > 2:66403/1‑76 TATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAG > 1:634511/1‑76 GGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGT > 1:1191584/1‑76 GTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTG > 2:1164212/1‑76 TCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGT > 1:894736/1‑76 TAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATT < 2:972618/76‑1 GGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTAT < 1:233160/76‑1 CATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTA < 2:1161275/76‑1 TCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCC > 2:1199490/1‑76 TCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCC > 2:1199483/1‑76 TCCTNCGAACAAGATGCAAGAAATGACACAAAGACAGCCNTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCC < 1:180692/76‑1 CTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCA < 1:170912/76‑1 CTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCA > 1:616883/1‑76 CTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCA < 2:118291/76‑1 TCGAACAAGATGCANGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACn < 2:223660/76‑2 CGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCG < 1:809648/76‑1 GAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGT < 1:1408201/76‑1 GAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGT < 2:22359/76‑1 GAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGT > 1:975661/1‑76 CAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCG > 2:991983/1‑76 AAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGG < 1:1333825/76‑1 AAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGG > 2:964691/1‑76 TGCAAGAAAAGACATAATGACAGCGCTTCTANGAGTGATTAGCGTGNTGGTGNTTATTATCCCACCGTGCGGGGCT < 2:198586/76‑1 GCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTG < 2:289562/76‑1 GCAAGAAAAGACAAAATGACAGCCCTTCCACGAGAGCGTAGCGTGGTNGTGATTATTATCCCACCGTGCGGGGCTG > 1:138893/1‑76 CAAGAAAAGACAAAATGACAGCCCTTCTACCAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGCGGCTGC > 1:1402911/1‑76 CAAGAAAAGACAAAATGACAGCCCTTCTACCAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGCGGCTGC > 1:1402904/1‑76 AAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGG > 2:1146078/1‑76 AAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGG < 1:860656/76‑1 AAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGG < 1:730665/76‑1 AGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGA > 1:321738/1‑76 GACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGAC < 2:634511/76‑1 ACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACG < 2:1416549/76‑1 AAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGG > 2:605154/1‑76 AATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGA < 2:712266/76‑1 AATGACAGCCCTTCNACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGn < 2:213035/76‑2 ATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAA > 2:1169202/1‑76 ATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAA < 2:905626/76‑1 GACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAG < 2:497473/76‑1 GACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAG < 2:549841/76‑1 GACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAG > 1:1084979/1‑76 CTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGAT > 2:706245/1‑76 CTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGAT > 2:71741/1‑76 CGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAA < 1:1498546/76‑1 CGAGTGATTAGCGTGGTGGTCANNATTATCCCACNNTGCGGGGCCGCACTCGGACGAGGAAAGGCTTAGAGATCAA < 1:1375049/76‑1 AGCGTGGTGGTGATNATTATCACACCGTGCGGGGCTGCACTTGGACGAGGAAATGCTTGGAGATCAAGCCTTAACG < 2:233192/76‑1 GCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGA > 1:668995/1‑76 CGTGGTGGNGCTTATTATCNCACCGTGCGGGGCTGCACTTGGNCGAGGAAAGGCTTAGAGATCAAGCCTTAACGAA < 2:1278745/76‑1 CAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3912065‑3912148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAA > REL606/3912164‑3912238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |