| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 3,912,149 | Δ15 bp | coding (28‑42/99 nt) | ilvL → | ilvG operon leader peptide |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 3912149 | 3912163 | 15 | 46 [0] | [0] 46 | ilvL | ilvG operon leader peptide |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3912148 | 0 (0.000) | 43 (1.010) | 33/132 | 0.3 | 100% | coding (27/99 nt) | ilvL | ilvG operon leader peptide |
| ? | REL606 | 3912164 = | 0 (0.000) | coding (43/99 nt) | ilvL | ilvG operon leader peptide | |||||
GGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGA > REL606/3912075‑3912223 | ggTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgt > 1:1191584‑M1/1‑74 (MQ=255) gTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtg > 2:1164212‑M1/1‑73 (MQ=255) tctTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggt > 1:894736‑M1/1‑68 (MQ=255) tAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgatt < 2:972618‑M1/76‑13 (MQ=255) ggCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattat < 1:233160‑M1/76‑15 (MQ=255) cATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattatta < 2:1161275‑M1/76‑17 (MQ=255) tCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcc > 2:1199490‑M1/1‑57 (MQ=255) tCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcc > 2:1199483‑M1/1‑57 (MQ=255) tCCTNCGAACAAGATGCAAGAAATGACACAAAGACAGCCNTTCTACGAGTGATTAGCgtggtggtgattattatcc < 1:180692‑M1/76‑20 (MQ=255) cTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatccca < 2:118291‑M1/76‑22 (MQ=255) cTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatccca < 1:170912‑M1/76‑22 (MQ=255) cTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatccca > 1:616883‑M1/1‑55 (MQ=255) tCGAACAAGATGCANGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccacn < 2:223660‑M1/76‑24 (MQ=255) cGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccg < 1:809648‑M1/76‑25 (MQ=255) gAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgt < 2:22359‑M1/76‑26 (MQ=255) gAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgt < 1:1408201‑M1/76‑26 (MQ=255) gAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgt > 1:975661‑M1/1‑51 (MQ=255) cAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcg > 2:991983‑M1/1‑48 (MQ=255) aaGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcgg > 2:964691‑M1/1‑47 (MQ=255) aaGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcgg < 1:1333825‑M1/76‑30 (MQ=255) tGCAAGAAAAGACATAATGACAGCGCTTCTANGAGTGATTAGCgtgntggtgnttattatcccaccgtgcggggct < 2:198586‑M1/76‑34 (MQ=255) gCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctg < 2:289562‑M1/76‑35 (MQ=255) gCAAGAAAAGACAAAATGACAGCCCTTCCACGAGAGCGTAGCgtggtngtgattattatcccaccgtgcggggctg > 1:138893‑M1/1‑42 (MQ=255) cAAGAAAAGACAAAATGACAGCCCTTCTACCAGTGATTAGCgtggtggtgattattatcccaccgtgcgcggctgc > 1:1402904‑M1/1‑41 (MQ=255) cAAGAAAAGACAAAATGACAGCCCTTCTACCAGTGATTAGCgtggtggtgattattatcccaccgtgcgcggctgc > 1:1402911‑M1/1‑41 (MQ=255) aaGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttgg < 1:730665‑M1/76‑42 (MQ=255) aaGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttgg < 1:860656‑M1/76‑42 (MQ=255) aaGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttgg > 2:1146078‑M1/1‑35 (MQ=255) aGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttgga > 1:321738‑M1/1‑34 (MQ=255) gACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggac < 2:634511‑M1/76‑44 (MQ=255) aCAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacg < 2:1416549‑M1/76‑45 (MQ=255) aaaTGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgagg > 2:605154‑M1/1‑29 (MQ=255) aaTGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgagga < 2:712266‑M1/76‑49 (MQ=255) aaTGACAGCCCTTCNACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggn < 2:213035‑M1/76‑49 (MQ=255) aTGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaa > 2:1169202‑M1/1‑27 (MQ=255) aTGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaa < 2:905626‑M1/76‑50 (MQ=255) gACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaag > 1:1084979‑M1/1‑25 (MQ=255) gACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaag < 2:549841‑M1/76‑52 (MQ=255) gACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaag < 2:497473‑M1/76‑52 (MQ=255) cTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagat > 2:706245‑M1/1‑15 (MQ=255) cTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagat > 2:71741‑M1/1‑15 (MQ=255) cGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaa < 1:1498546‑M1/76‑65 (MQ=255) cGAGTGATTAGCgtggtggtcannattatcccacnntgcggggccgcactcggacgaggaaaggcttagagatcaa < 1:1375049‑M1/76‑65 (MQ=255) aGCgtggtggtgatnattatcacaccgtgcggggctgcacttggacgaggaaatgcttggagatcaagccttaacg < 2:233192‑M1/76‑74 (MQ=255) gCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagccttaacga > 1:668995‑M1/1‑2 (MQ=255) cgtggtggngcttattatcncaccgtgcggggctgcacttggncgaggaaaggcttagagatcaagccttaacgaa < 2:1278745‑M1/76‑76 (MQ=255) | GGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGA > REL606/3912075‑3912223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |