| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 475,285 | Δ2,907 bp | [ybaL]–[ushA] | [ybaL], fsr, [ushA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 475285 | 478191 | 2907 | 31 [0] | [0] 32 | [ybaL]–[ushA] | [ybaL],fsr,[ushA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 475284 | 0 (0.000) | 27 (0.800) | 23/138 | 0.5 | 100% | coding (22/1677 nt) | ybaL | predicted transporter with NAD(P)‑binding Rossmann‑fold domain |
| ? | REL606 | 478192 = | 0 (0.000) | coding (1212/1653 nt) | ushA | UDP‑sugar hydrolase | |||||
CACCAGAGGAGAAATACGTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/475204‑475284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgatGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATAAAAACGTGCTGAAAGTGCAGCCATT > REL606/478192‑478266 nACCAGAGGAGAAATACGTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTG > 1:91609/2‑76CACCAGAGGAGAAATACGTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTG > 1:850343/1‑76 CAGAGGAGAAATACGTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTG < 2:757981/76‑1 AGAGGAGAAATACGTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGA > 2:75522/1‑76 GAGAAATACGTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAG < 1:635967/76‑1 AGAAATACGTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGC > 2:1079074/1‑76 AAATACGTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGG < 2:464999/76‑1 GTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGG < 2:729253/76‑1 GTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGG < 2:194118/76‑1 TAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGA > 2:940058/1‑76 TTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTC > 2:894125/1‑76 TTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTC < 1:191341/76‑1 TTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTG > 2:769197/1‑76 TGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGA > 1:426190/1‑76 TGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGA > 1:51829/1‑76 TGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTAATGAGCGGATGCGGAATTCGTGA > 1:996388/1‑76 GGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGAT < 1:841773/76‑1 ATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCG < 1:482486/76‑1 TGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGA < 2:91609/76‑1 CCGAGGATAAAGGCGAGCACAAGGCCTCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAG < 2:866777/76‑1 CCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAG < 2:392442/76‑1 CCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAG > 1:690184/1‑76 AAGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATA > 2:120093/1‑76 AAGGCGAGCACAAGGCCACCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGANTCTATCGAAGCAGGCGATA < 1:1089072/76‑1 AGGCGAGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATAT < 1:646048/76‑1 AGCACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCT < 2:285424/76‑1 CANAAGTCCGCGAACAATGGTGGTGGTGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTAT < 2:1102835/76‑1 ACAAGGCCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATA < 1:247479/76‑1 CCGCCAACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATAAAAACG < 2:896895/76‑1 AACAATGGTGGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATAAAAACGTGCTG < 2:786409/76‑1 ACAATGGTGGTGATGAGCGGAGGCGGAACTCGTGATCATATCGAAGCNGGAGATATCAGCTATAAAAACGTGCTGA > 1:96860/1‑76 GGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATAAAAACGTGCTGAAAGTGCAG < 2:588379/76‑1 GGTGATGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATAAAAACGTGCTGAAAGTGCAG < 1:376645/76‑1 TGAGCGGANGCGGAGTTCGNGATTCTATCGAAGCAGGCGATANCAGCTATAAAAACGTGCTGAAAGTGCAGCCATT < 2:971857/76‑1 TGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATAAAAACGTGCTGAAAGTGCAGCCATT < 1:529705/76‑1 CACCAGAGGAGAAATACGTAGTTTATTGGCCAGCATGCCGAGGATAAAGGCGAGCACAAGGCCGCCAACAATGGTGGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/475204‑475284‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgatGAGCGGAGGCGGAATTCGTGATTCTATCGAAGCAGGCGATATCAGCTATAAAAACGTGCTGAAAGTGCAGCCATT > REL606/478192‑478266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |