| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 787,879 | Δ12,090 bp | ECB_00726–ECB_00739 | ECB_00726, ECB_00727, ECB_00728, ECB_00729, ECB_00730, ECB_00731, ECB_00732, ECB_00733, ECB_00734, ECB_00735, ECB_00736, ECB_00737, ECB_00738, ECB_00739 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 787879 | 799968 | 12090 | 46 [0] | [0] 45 | ECB_00726–ECB_00739 | ECB_00726,ECB_00727,ECB_00728,ECB_00729,ECB_00730,ECB_00731,ECB_00732,ECB_00733,ECB_00734,ECB_00735,ECB_00736,ECB_00737,ECB_00738,ECB_00739 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 787878 | 0 (0.000) | 38 (1.050) | 30/120 | 0.2 | 100% | intergenic (‑61/+74) | ybhC/ECB_00726 | predicted pectinesterase/integrase |
| ? | REL606 | 799969 = | 0 (0.000) | intergenic (‑694/+90) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor | |||||
AGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/787792‑787878‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttttttatactaaTTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGC > REL606/799969‑800043 AGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTT < 2:91840/76‑1 GACGGGAAACTAAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTT < 2:1328424/76‑1 GGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTT > 1:1023988/1‑76 GAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAAT > 2:837897/1‑76 GAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAAT > 2:314283/1‑76 AAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATT > 2:75967/1‑76 AAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTT < 1:1024313/76‑1 AAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTT > 2:965167/1‑76 AATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTG < 2:371475/76‑1 AATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTG < 1:485438/76‑1 ATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGA > 1:427868/1‑76 GTTCACAGGTTGCTCCGGGCTATGAAATAGAAANATGAATCCGATGAAGCCTGCTTNTTTATACTTANTTGAGCGA > 2:1201185/1‑76 TCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAA < 1:738574/76‑1 CACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAAC > 2:841750/1‑76 CACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAAC > 1:682756/1‑76 CACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAAC < 1:1073077/76‑1 CAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGG > 2:878359/1‑76 CAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGG > 2:1328595/1‑76 GCTCCGGGNTGTGATATAGNAAAATGAATCCGTTGAAGCCTGNTTTTTTATACTAATTTGAGCGAAACGGGAAGGT < 2:1210000/76‑1 GCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATGCTAATTTGAGNGAAACGGGAAtga > 1:193096/1‑73 GCTCCGGGCNATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGT > 1:37078/1‑76 CTCCGCGCTATGAAATAGAAAAAGGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTA < 2:1393781/76‑1 TCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAA < 2:847160/76‑1 CTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGAC < 2:872822/76‑1 TATGAAATAGAAAAATGAATCCGTTGANGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACA > 1:1444149/1‑76 AAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAA > 2:1100156/1‑76 TAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTT < 1:259910/76‑1 AGAAAAATGAATCCGTTGAAGCCTGCTTTTATATACTAATTTGAGCGAAACGGGAAGGTAAANAGACAAAAAGTTG > 2:1324396/1‑76 ATCCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATAC > 2:490305/1‑76 ATCCGTTGAAGCCTACTTTTTAATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACACAAAGTTGTTTTTAATAC < 2:219478/76‑1 CCGTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCT > 1:209094/1‑76 GTTGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTT > 2:353268/1‑76 TGAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAA < 1:493899/76‑1 GAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAG < 1:1100156/76‑1 GAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAG < 2:682756/76‑1 GAAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGNTGTTTTTAATACCTTTAAG < 1:1341035/76‑1 AAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGT < 2:255445/76‑1 AAGCCTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGT > 2:542035/1‑76 CTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATA > 1:1087802/1‑76 CTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATA < 2:682991/76‑1 CTGCTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATA > 2:1006313/1‑76 GCTTTTTTATACTAATTTGAGCGAAACGGGTAGGTAAAAAGACAACAAGTTGTTTTTAATACNTTTAAGTGATACC > 2:1314214/1‑76 CTTTTTTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCA > 2:734161/1‑76 TTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGG > 1:59997/1‑76 TTATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGG > 1:778429/1‑76 TATACTAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGC < 1:618931/76‑1 TAATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGC > 1:1189255/1‑76 AATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCG > 1:273252/1‑76 ATTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGC > 1:201813/1‑76 AGACGGGAAACTGAAAATGTGTTCACAGGTTGCTCCGGGCTATGAAATAGAAAAATGAATCCGTTGAAGCCTGCTTTTTTATACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/787792‑787878‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttttttatactaaTTTGAGCGAAACGGGAAGGTAAAAAGACAAAAAGTTGTTTTTAATACCTTTAAGTGATACCAGATGGCATTGCGC > REL606/799969‑800043 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |