New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	3011924 =	57 (1.920)	3 (0.110)	3/142	3.8	5.4%	intergenic (‑364/‑210)	ECB_02812/ECB_02813	conserved hypothetical protein/hypothetical protein
	?	REL606	3012055 =	51 (1.820)					intergenic (‑495/‑79)	ECB_02812/ECB_02813	conserved hypothetical protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAAGAACGTATGACTATGTTATTAATAAATAAAACACGCAAATAATGGTGATGTTGTTTTGTGATTAACTATTTAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3012001‑3011924 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtAGGAAACATTTTAATAAATGATAAAAATCCTAAATTCCTTGTTCATAATGTAGGGGTGTGTTAAATAGGTGGG  >  REL606/3012055‑3012127                                                                                                                                                         AAAGAACGTATGACTATGTTATTAATAGATAAAACACGCAAATAATGGTGATGTTGTTTTGTGATTAACTATTTAA                                                                             <  1:578264/76‑1  AAGAACGTATGACTATGTTATTAATAAATAAAACACGCAAATAATGGTGATGTTGTTTTGTGATTAACTATTTAAG                                                                            >  2:634021/1‑76  AAGAACGTATGACTATGTTATTAATAAATAAAACACGCAAATAATGGTGATGTTGTTTTGTGATTAACTATTTAAG                                                                            >  2:687320/1‑76  AAGAACGTATGACTATGTNATTAATAAATAAAATACGCAAATAATGGTGATGTTGTTTTGTGATTAACTATTTAAG                                                                            <  1:754768/76‑1   AGAACGTATGACTATGTTATTAATAAATAAAACACGCAAATAATGGTGATGTTGTTTTGTGATTAACTATTTAAGT                                                                           <  1:264942/76‑1              CTATGTTATTAATAAATAAAACACGCAAATAATGGTTATGTTGTTTTGTGATTAACTATTTAAGTAGGAAACATTT                                                                <  2:695992/76‑1                               AAAACACGCAAATAATGGTGATGTTGTTTTGTGATTAACTATTTAAGTAGGAAACATTTTAATAAATGATAAAAAT                                               <  2:56847/76‑1                                      GCAAATAATGGTGATGTTGTTTTGTGATTAACTATTTAAGTAGAAAACATTTTAATAAATGAT‑AAAATCCTAAATT                                       <  2:771836/76‑1                                                                           AAGTAGGAAACATTTTAATAAATGATAAAAATCCTAAATTCCTTGTTCATAATGTAGGGGTGTGTTAAAT         >  1:499501/1‑70                                                                           AAGTAGGAAACATTTTAATAAATGATAAAAATCCTAAATTCCTTGTTCATAATGTAGGGGTGTGTTAAAT         <  2:499501/70‑1                                                                            AGTAGGAAACATTTTAATAAATGATAAAAATCCTAAATTCCTTGTTCATAATGTAGGGGTGTGTTAAATAGGTGGG  >  1:51945/1‑76                                                                                                                                                         AAAGAACGTATGACTATGTTATTAATAAATAAAACACGCAAATAATGGTGATGTTGTTTTGTGATTAACTATTTAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3012001‑3011924 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagtAGGAAACATTTTAATAAATGATAAAAATCCTAAATTCCTTGTTCATAATGTAGGGGTGTGTTAAATAGGTGGG  >  REL606/3012055‑3012127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.