New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	3011924 =	57 (1.920)	3 (0.110)	3/142	3.8	5.4%	intergenic (‑364/‑210)	ECB_02812/ECB_02813	conserved hypothetical protein/hypothetical protein
	?	REL606	3012055 =	51 (1.820)					intergenic (‑495/‑79)	ECB_02812/ECB_02813	conserved hypothetical protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTCAATAGTCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCATACGTTCT  >  REL606/3011849‑3011999                                                                            |                                                                            ttCAATAGTCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCa                                                                             <  1:242857/76‑1 (MQ=255)  tCAATAGTCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCAc                                                                            >  1:933997/1‑76 (MQ=255)    aaTAGTCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACtt                                                                          >  1:922363/1‑76 (MQ=255)    aaTAGTCACCGCTAAAATNTTATTATTTTCCTCATCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACtt                                                                          <  1:756377/76‑1 (MQ=255)     aTAGTCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTa                                                                         <  2:922362/76‑1 (MQ=255)       aGTCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTNTCAACCNGTTTATTATGCCGCACTTaan                                                                       >  1:811340/1‑75 (MQ=255)       aGTCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGCAAATTNTCAACCNGTTTATTATGCCGCACTTaan                                                                       >  1:811347/1‑75 (MQ=255)        gTCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAAt                                                                      <  1:916563/76‑1 (MQ=255)         tCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTNTTATGCCGCACTTAAATa                                                                     >  1:760053/1‑76 (MQ=255)            ccGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGtt                                                                  >  1:627000/1‑76 (MQ=255)            ccGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGtt                                                                  <  1:613327/76‑1 (MQ=255)            ccGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGtt                                                                  >  1:307482/1‑76 (MQ=255)               cTAAAATTTTATTATTTTCCTCTTACTTAGAGGGAAATTGTCGACCTGTTTACCATGCCGTACTTACATACTTacc                                                               >  1:883016/1‑74 (MQ=255)                   aaTTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATcaca                                                           <  2:215491/76‑1 (MQ=255)                   aaTTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATcaca                                                           >  1:590044/1‑76 (MQ=255)                   aaTTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATcaca                                                           <  2:335328/76‑1 (MQ=255)                    aTTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACaa                                                          <  2:234403/76‑1 (MQ=255)                     ttttATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACaaa                                                         <  2:760053/76‑1 (MQ=255)                      tttATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACaaaa                                                        <  1:466777/76‑1 (MQ=255)                      tttATTATTTTACTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTNAAATAGTTAATCACaaaa                                                        >  1:759065/1‑76 (MQ=255)                         attattTTCCTCTTCTTTNCATGGAAATTGTCAGCCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAaacaa                                                     <  1:754494/76‑1 (MQ=255)                          ntantNGCCTCTGCNGTACAGGTGAATGGTCANCCTGTTTATTATGCCGCACTTAAATACTTAATCACAAaacaac                                                    <  1:814707/75‑1 (MQ=255)                           tattTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAacaaca                                                   >  1:524959/1‑76 (MQ=255)                             ttttCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATc                                                 <  2:239985/76‑1 (MQ=255)                              tttCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCa                                                <  2:651603/76‑1 (MQ=255)                                tCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCAcc                                              >  1:674589/1‑76 (MQ=255)                                  ctctTCTTTACATGGAAATTGTCAATCTGTTTATNATGCCGCACTTAAATANTGCATCACAAAACAACNTCACCat                                            >  2:855934/1‑76 (MQ=255)                                  ctctTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCat                                            >  2:899848/1‑76 (MQ=255)                                     ttcttTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCatgat                                         >  1:465122/1‑76 (MQ=255)                                      tcttTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCattatt                                        <  2:152020/76‑1 (MQ=255)                                         ttACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCattatt                                        <  2:553658/73‑1 (MQ=255)                                         ttACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCattatt                                        >  1:553658/1‑73 (MQ=255)                                            naTGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCgtg                                  >  1:14615/2‑76 (MQ=255)                                            cATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCgtg                                  >  1:439068/1‑76 (MQ=255)                                            cATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCgtg                                  >  2:760960/1‑76 (MQ=255)                                              tGGAAATTGTCAACCTGTTTATTATGCCGCGCTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGtt                                <  2:452041/76‑1 (MQ=255)                                              tGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGtt                                >  1:325836/1‑76 (MQ=255)                                              tGGAAATCGTCAACCTGTTTATTATGCCGCACTTAAATAGTTACTCACAAAACAACATCAACATTATTTGCGTGtt                                >  1:866334/1‑76 (MQ=255)                                                      gTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTttatttat                        <  2:588838/76‑1 (MQ=255)                                                        cAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATttatta                      >  1:50087/1‑76 (MQ=255)                                                        cAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATttatta                      <  2:389378/76‑1 (MQ=255)                                                          aCCTGTTTATTATGCCGCNCTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATtaat                    <  1:760960/76‑1 (MQ=255)                                                           ccTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTGTTTGCGTGTTTTATTTATtaata                   <  1:741882/76‑1 (MQ=255)                                                             tGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAAc                 >  2:771379/1‑76 (MQ=255)                                                             tGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAAc                 >  2:254663/1‑76 (MQ=255)                                                               tttATTCTGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACAt               >  1:144217/1‑76 (MQ=255)                                                                ttattaTGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATa              <  1:419416/76‑1 (MQ=255)                                                                ttattaTGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATa              >  1:194511/1‑76 (MQ=255)                                                                    tatGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCa          <  1:561891/76‑1 (MQ=255)                                                                    tatGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCa          >  2:354089/1‑76 (MQ=255)                                                                     atGCCGCACTTAAATAGTTAATCACAAAACAACNTCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCAt         <  1:776875/76‑1 (MQ=255)                                                                     atGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCCTGTTTTATTTATTAATAACATAGTTAt         >  1:460812/1‑76 (MQ=255)                                                                     atGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCATGTTTTATTTATTAATAACATAGTAAt         >  1:460803/1‑76 (MQ=255)                                                                      tGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCATa        <  2:460744/76‑1 (MQ=255)                                                                         cGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCATACGt     <  1:960385/76‑1 (MQ=255)                                                                          gCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCATACGtt    <  2:670520/76‑1 (MQ=255)                                                                           cACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCATACGTTc   >  2:546740/1‑76 (MQ=255)                                                                            aCTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCATACGTTCt  >  1:264942/1‑76 (MQ=255)                                                                            |                                                                            TTCAATAGTCACCGCTAAAATTTTATTATTTTCCTCTTCTTTACATGGAAATTGTCAACCTGTTTATTATGCCGCACTTAAATAGTTAATCACAAAACAACATCACCATTATTTGCGTGTTTTATTTATTAATAACATAGTCATACGTTCT  >  REL606/3011849‑3011999

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.