| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4323213 = | 69 (1.220) | 62 (1.150) | 45/144 | 0.1 | 48.8% | coding (1119/1410 nt) | melB | melibiose:sodium symporter |
| ? | REL606 | = 4375145 | 64 (1.180) | coding (926/1338 nt) | amiB | N‑acetylmuramoyl‑l‑alanine amidase II | |||||
Only 100 of 139 total aligned reads displayed.
CGTTGATTACGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTGAACAG > REL606/4323138‑4323288 | ggtgctctctaaccgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctg > 2:1609577‑M1/76‑76 (MQ=255)ggtgctctctaaccgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctg < 2:1410558‑M1/1‑1 (MQ=255)ggtgctctctaaccgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctg < 2:708873‑M1/1‑1 (MQ=255)ggtgctctctaaccgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctg > 1:1360331‑M1/76‑76 (MQ=255) ttGATTACGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAggg > 1:849155/1‑76 (MQ=255) tgctctctaaccgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctggg < 1:352641‑M1/3‑1 (MQ=255) tGATTACGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGc > 1:1737731/1‑76 (MQ=255) gATTACGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCg < 2:1123152/76‑1 (MQ=255) ctaaccgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTc < 2:1414798‑M1/9‑1 (MQ=255) ctaaccgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTc > 2:741583‑M1/68‑76 (MQ=255) aCGGTGAATATAAACTGCACGTACGCTGTGAAAGTATGGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTc < 2:345160/76‑1 (MQ=255) aCGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGTGGTTc < 1:1245080/76‑1 (MQ=255) aCGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTc < 2:969586/76‑1 (MQ=255) aCGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTc < 2:671334/76‑1 (MQ=255) aCGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTc < 2:779274/76‑1 (MQ=255) aCGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTc < 2:904870/76‑1 (MQ=255) taaccgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCa > 2:251164‑M1/67‑76 (MQ=255) cGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCa < 2:155382/76‑1 (MQ=255) cGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCa > 1:967967/1‑76 (MQ=255) aaccgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGGCGTTCAg < 2:1324457‑M1/11‑1 (MQ=255) gAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCt < 2:597057/76‑1 (MQ=255) cgtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCt > 2:2904‑M1/63‑76 (MQ=255) gtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGGCtt < 1:460458‑M1/15‑1 (MQ=255) gtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCtt > 2:473348‑M1/62‑76 (MQ=255) gtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCtt < 2:1171824‑M1/15‑1 (MQ=255) gtcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCtt < 1:297541‑M1/15‑1 (MQ=255) aaTATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCtt > 1:64216/1‑76 (MQ=255) tcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCttt > 2:580443‑M1/61‑76 (MQ=255) tcgtgccaacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCttt > 2:112176‑M1/61‑76 (MQ=255) atatAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCttt < 2:7832/76‑1 (MQ=255) atatAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCttt < 2:356194/76‑1 (MQ=255) aaaCTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGCGCGGTTCAGCCTTTGCgg > 2:603258/1‑76 (MQ=255) cTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAANGGCGGTTCAGCCTTTGCGGCtt < 2:244947/76‑1 (MQ=255) aacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCtt > 2:1467785‑M1/54‑76 (MQ=255) aacagtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCtt < 2:1451744‑M1/23‑1 (MQ=255) cACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCttttt > 2:184309/1‑76 (MQ=255) cACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCttttt > 2:33111/1‑76 (MQ=255) gtgaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCtttttt < 1:1463458‑M1/27‑1 (MQ=255) gaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCa > 2:1202650‑M1/48‑76 (MQ=255) gaaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCa < 2:1060240‑M1/29‑1 (MQ=255) gTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCa < 2:701400/76‑1 (MQ=255) aaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCAt < 2:1627276‑M1/30‑1 (MQ=255) aaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCAt < 1:404383‑M1/30‑1 (MQ=255) aaatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCAt < 1:583617‑M1/30‑1 (MQ=255) aatggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCAtt > 2:650935‑M1/46‑76 (MQ=255) ggccagctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCg > 2:1416437‑M1/43‑76 (MQ=255) tgtgAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCgg > 1:1756301/1‑76 (MQ=255) tgtgAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCgg > 1:218376/1‑76 (MQ=255) gtgAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGt > 1:913360/1‑76 (MQ=255) tgAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGtt < 2:1034958/76‑1 (MQ=255) tgAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGtt < 2:978001/76‑1 (MQ=255) gAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTtg > 2:1401292/1‑76 (MQ=255) ctggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTtgtg < 1:320767‑M1/40‑1 (MQ=255) aaGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTtgtg > 1:74747/1‑76 (MQ=255) aaGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTtgtg < 2:1568060/76‑1 (MQ=255) aGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTgtgt > 1:1670409/1‑76 (MQ=255) aGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTgtgt > 1:1177623/1‑76 (MQ=255) ggctggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGtt > 2:1180910‑M1/35‑76 (MQ=255) tggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAgg < 2:406560‑M1/45‑1 (MQ=255) tggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTCGGGTTGTGTTAgg < 2:1127384‑M1/45‑1 (MQ=255) ggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTTAGGCCTTTTTCATTGCGGTTGTGTTAggg < 2:309654‑M1/46‑1 (MQ=255) ggagcagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAggg < 2:429138‑M1/46‑1 (MQ=255) cGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAggg > 1:154250/1‑76 (MQ=255) cTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGgat < 1:1272849/76‑1 (MQ=255) cTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGgat > 1:761044/1‑76 (MQ=255) ttACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCCGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGgatg > 2:1295462/1‑76 (MQ=255) ttACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGgatg > 2:580559/1‑76 (MQ=255) ttACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGgatg > 2:799983/1‑76 (MQ=255) ttACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGgatg > 2:790357/1‑76 (MQ=255) cagcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGggtga < 1:775234‑M1/50‑1 (MQ=255) agcacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGgatgat > 1:932802‑M1/26‑76 (MQ=255) aCTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGgatgat > 1:1662724/1‑76 (MQ=255) cacgagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTg < 2:890442‑M1/53‑1 (MQ=255) ccGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGGGTTAGGGCTGATTgg > 2:1431127/1‑76 (MQ=255) gagaaacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGGTGATTGGCt < 1:1574121‑M1/56‑1 (MQ=255) tGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTa < 1:982053/76‑1 (MQ=255) aacagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGt > 1:335228‑M1/17‑76 (MQ=255) aGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGt > 1:1332307/1‑76 (MQ=255) aGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGt > 1:676935/1‑76 (MQ=255) acagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTa > 1:1421848‑M1/16‑76 (MQ=255) cagtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTAc < 2:184801‑M1/62‑1 (MQ=255) agtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTAcc > 1:1627276‑M1/14‑76 (MQ=255) tATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCg > 1:681664/1‑76 (MQ=255) gtcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCg > 2:1334984‑M1/13‑76 (MQ=255) tcggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGa < 2:1652437‑M1/65‑1 (MQ=255) cggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGGTGATTGGCTATGGACCGaa < 1:872751‑M1/66‑1 (MQ=255) cggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGaa < 1:938700‑M1/66‑1 (MQ=255) cggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGaa > 2:93744‑M1/11‑76 (MQ=255) ggtggtGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAAt > 1:1265829/1‑76 (MQ=255) ggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAAt > 1:1473759‑M1/10‑76 (MQ=255) ggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAAt > 1:1039276‑M1/10‑76 (MQ=255) ggagctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAAt < 2:1621757‑M1/67‑1 (MQ=255) gtggtgAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATg > 1:261040/1‑76 (MQ=255) tggtgAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGt > 2:1462860/1‑76 (MQ=255) gtgAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTg < 1:593219/76‑1 (MQ=255) ctgctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTg > 1:96603‑M1/6‑76 (MQ=255) gctGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTGaa < 2:816159‑M1/73‑1 (MQ=255) tGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTGAACa < 1:1063813‑M1/75‑1 (MQ=255) GGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTGAACAg < 2:401229‑M1/76‑1 (MQ=255) GGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTGAACAg < 2:1302379‑M1/76‑1 (MQ=255) | CGTTGATTACGGTGAATATAAACTGCACGTACGCTGTGAAAGTATCGCTTACTCCGTGCAGACTATGGTGGTGAAGGGCGGTTCAGCCTTTGCGGCTTTTTTCATTGCGGTTGTGTTAGGGATGATTGGCTATGTACCGAATGTTGAACAG > REL606/4323138‑4323288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |