| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4323213 = | 69 (1.220) | 62 (1.150) | 45/144 | 0.1 | 48.8% | coding (1119/1410 nt) | melB | melibiose:sodium symporter |
| ? | REL606 | = 4375145 | 64 (1.180) | coding (926/1338 nt) | amiB | N‑acetylmuramoyl‑l‑alanine amidase II | |||||
Only 100 of 135 total aligned reads displayed.
GGGTGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACAGTT > REL606/4375070‑4375220 | gggTGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAgctgct > 1:1342379/1‑76 (MQ=255)gggTGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAgctgct < 1:87059/76‑1 (MQ=255) ggTGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTg > 2:1609577‑M2/1‑75 (MQ=255) ggTGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTg > 1:1360331‑M2/1‑75 (MQ=255) ggTGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTg > 1:1360336‑M2/1‑75 (MQ=255) ggTGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTg < 2:708873‑M2/76‑2 (MQ=255) ggTGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTg < 2:1410558‑M2/76‑2 (MQ=255) tGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTggg < 1:352641‑M2/76‑4 (MQ=255) gCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCtgggt > 1:222496/1‑76 (MQ=255) gCTCTCTAACCGTCGTGCCAACAGCGAAATGGCCAGCCGGCTGGAGCAGCACGAGAAACAGCCGGACGCGCtgggg > 1:793204/1‑75 (MQ=255) tctctAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcgg < 1:461556‑M2/76‑7 (MQ=255) tctAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTgggg > 1:998841/1‑76 (MQ=255) ctAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttc < 2:1414798‑M2/76‑10 (MQ=255) ctAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttc > 2:741583‑M2/1‑67 (MQ=255) ctAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGc > 1:1116968/1‑76 (MQ=255) tAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttca > 1:1298265‑M2/1‑66 (MQ=255) tAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttca > 2:251164‑M2/1‑66 (MQ=255) aaCCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTggggcgttcag < 2:1324457‑M2/76‑12 (MQ=255) aaCCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCgg > 2:1508839/1‑76 (MQ=255) aaCCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCgg > 1:508757/1‑76 (MQ=255) cgtcgtGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcct > 2:2904‑M2/1‑62 (MQ=255) gtcgtGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctt > 2:473348‑M2/1‑61 (MQ=255) gtcgtGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctt < 1:297541‑M2/76‑16 (MQ=255) gtcgtGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctt < 2:1171824‑M2/76‑16 (MQ=255) cgtGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGGGAtg > 1:959508/1‑76 (MQ=255) cgtGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGGGAtg > 1:825498/1‑76 (MQ=255) tGCCAACAGTGAAATGGCCAGCTGTCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGAtgtg < 2:942714/76‑1 (MQ=255) tGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcg > 1:1674006‑M2/1‑57 (MQ=255) tGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGAtgtg > 2:944321/1‑76 (MQ=255) cAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTg > 2:1632584/1‑76 (MQ=255) aaCAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggctt < 2:1451744‑M2/76‑24 (MQ=255) cAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCg < 1:1463476/76‑1 (MQ=255) cAGGGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCg < 1:1140493/76‑1 (MQ=255) gAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttca > 2:1202650‑M2/1‑47 (MQ=255) gAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttca < 2:1060240‑M2/76‑30 (MQ=255) gAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAAca < 2:585420/76‑1 (MQ=255) aaaTGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcat < 1:583617‑M2/76‑31 (MQ=255) aaaTGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcat < 2:1627276‑M2/76‑31 (MQ=255) aaaTGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcat > 2:1106492‑M2/1‑46 (MQ=255) aaaTGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAAcag > 1:1434024/1‑76 (MQ=255) aaTGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcatt > 2:650935‑M2/1‑45 (MQ=255) aaTGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAAcagt < 1:711863/76‑1 (MQ=255) aTGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAAcagtc < 2:1445886/76‑1 (MQ=255) aTGGCCAGCGGGCTGGAGCAGCACGAGAAACAGGCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAAcagtc < 2:1223110/76‑1 (MQ=255) ggCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcg > 2:1416437‑M2/1‑42 (MQ=255) gCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAAcagtcagt < 2:1515029/76‑1 (MQ=255) cAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCt > 2:1597726/1‑76 (MQ=255) aGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTg < 2:552074/76‑1 (MQ=255) tggctggAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGAcc > 1:1625447/1‑76 (MQ=255) ggctggAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgtt > 2:1180910‑M2/1‑34 (MQ=255) ctggAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCt < 1:404818/76‑1 (MQ=255) tggAGCAGCGCGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTa < 2:202466/76‑1 (MQ=255) tggAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagg < 2:432108‑M2/76‑46 (MQ=255) tggAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattcgggttgtgttagg < 2:1127384‑M2/76‑46 (MQ=255) tggAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTa > 1:1411891/1‑76 (MQ=255) tggAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTa > 2:1306746/1‑76 (MQ=255) tggAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTa > 1:428575/1‑76 (MQ=255) ggAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagccttttaggcctttttcattgcggttgtgttaggg < 2:309654‑M2/76‑47 (MQ=255) ggAGCAGCACGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttaggg < 2:429138‑M2/76‑47 (MQ=255) ggAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTAt > 2:1244134/1‑76 (MQ=255) ggAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTAt > 1:408122/1‑76 (MQ=255) gAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTAtt < 2:1140496/76‑1 (MQ=255) cagcaCGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttaggggtga < 1:775234‑M2/76‑51 (MQ=255) cagcaCGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatga > 2:607694‑M2/1‑26 (MQ=255) cagcaCGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatga < 2:1129784‑M2/76‑51 (MQ=255) agcaCGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgat > 1:940488‑M2/1‑25 (MQ=255) caCGAGAAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattg < 2:890442‑M2/76‑54 (MQ=255) caCGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGcc > 2:1696393/1‑76 (MQ=255) aCGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCa > 2:569896/1‑76 (MQ=255) cGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAg > 2:1475277/1‑76 (MQ=255) gagaAACAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttaggggtgattggct < 1:1574121‑M2/76‑57 (MQ=255) aaaCAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCgg < 1:707703/76‑1 (MQ=255) aaaCAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCgg > 2:1603349/1‑76 (MQ=255) aaaCAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCgg > 2:436872/1‑76 (MQ=255) aaCAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgt > 1:335228‑M2/1‑16 (MQ=255) aCAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgta > 1:1421848‑M2/1‑15 (MQ=255) aCAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTg < 2:687618/76‑1 (MQ=255) aCAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTg < 2:1353482/76‑1 (MQ=255) cAGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtac < 2:184801‑M2/76‑63 (MQ=255) aGTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtacc > 1:1627276‑M2/1‑13 (MQ=255) aGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCt < 1:674537/76‑1 (MQ=255) aGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCt > 1:1684060/1‑76 (MQ=255) gTCGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtaccg > 2:1334984‑M2/1‑12 (MQ=255) cGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttaggggtgattggctatggaccgaa < 1:872751‑M2/76‑67 (MQ=255) cGGAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtaccgaa < 1:938700‑M2/76‑67 (MQ=255) ggAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtaccgaat > 1:1473759‑M2/1‑9 (MQ=255) ggAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtaccgaat > 1:1039276‑M2/1‑9 (MQ=255) ggAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtaccgaat < 2:797858‑M2/76‑68 (MQ=255) ggAGCTGCTgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtaccgaat < 2:1621757‑M2/76‑68 (MQ=255) ggAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGAt < 2:823573/76‑1 (MQ=255) gAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGAtt > 2:182915/1‑76 (MQ=255) aGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGAttt < 2:803351/76‑1 (MQ=255) ctgctgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtaccgaatgttg < 2:884492‑M2/76‑72 (MQ=255) ctgctgGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGGGCCGGCTTCAc > 2:257684/1‑76 (MQ=255) tgctgGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACa > 1:370267/1‑76 (MQ=255) tgctgGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACa > 1:30364/1‑76 (MQ=255) gctgGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACAg > 2:788929/1‑76 (MQ=255) gctgGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACAg > 1:1042698/1‑76 (MQ=255) ctgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtaccgaatgttgaac < 1:1483448‑M2/76‑75 (MQ=255) tgggcggttcagcctttgcggcttttttcattgcggttgtgttagggatgattggctatgtaccgaatgttgaaca < 1:1063813‑M2/76‑76 (MQ=255) | GGGTGCTCTCTAACCGTCGTGCCAACAGTGAAATGGCCAGCTGGCTGGAGCAGCACGAGAAACAGTCGGAGCTGCTGGGTGGGGCGGGTGATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACAGTT > REL606/4375070‑4375220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |