| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 433,502 | (AAGAG)2→1 | [hupB] | [hupB] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 433501 = | 2 (0.040) | 46 (0.940) | 35/138 | 0.4 | 96.0% | intergenic (+204/‑5) | lon/hupB | DNA‑binding ATP‑dependent protease La/HU, DNA‑binding transcriptional regulator, beta subunit |
| ? | REL606 | = 433495 | 2 (0.040) | intergenic (+198/‑11) | lon/hupB | DNA‑binding ATP‑dependent protease La/HU, DNA‑binding transcriptional regulator, beta subunit | |||||
CTAACGCACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/433581‑433501‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcttcCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGCCAGCCATCCC < REL606/433495‑433422 CTAACGCACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCAC > 2:878125/1‑76CTAACGCACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCAC > 2:1216931/1‑76 TAACGCACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACT < 1:1234611/76‑1 TAACGCACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACT > 2:282742/1‑76 TAACGCACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACT > 1:497953/1‑76 CGCACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTT < 2:1142352/76‑1 CACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCC > 2:67721/1‑76 CACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCC > 2:330239/1‑76 CACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCC < 1:1487347/76‑1 AGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTAT < 2:579868/76‑1 CCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAA < 2:1439223/76‑1 CAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTT > 2:948635/1‑76 AGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTA > 1:1213415/1‑76 GCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTAT < 1:252580/76‑1 TTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATAT < 1:1137506/76‑1 TTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATAT > 1:484315/1‑76 AGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGC > 2:837148/1‑76 AGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGC > 2:241051/1‑76 GAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCA < 1:694199/76‑1 GAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCA < 2:1378173/76‑1 AGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCAC > 1:318496/1‑76 AGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCAC > 1:28471/1‑76 ATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTT > 2:148050/1‑76 ATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTT < 1:1599008/76‑1 CCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCT > 2:800099/1‑76 CCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCT > 2:409566/1‑76 CCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTC > 1:295766/1‑76 CCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTC > 1:147689/1‑76 CCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTC > 1:942366/1‑76 CTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCA < 2:265365/76‑1 CTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCA < 2:206567/76‑1 TGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAA < 1:106546/76‑1 TCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAA > 1:345801/1‑76 TCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAA < 2:792230/76‑1 TCTTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAA < 2:1628475/76‑1 TTGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACG < 1:202654/76‑1 TGTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGC > 1:179495/1‑76 GTCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCG > 1:1216363/1‑76 TCGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGC < 2:662815/76‑1 CGATCAATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCA < 1:948635/76‑1 ATTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTT > 2:1469994/1‑76 TTGAGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTA < 1:1579119/76‑1 AGATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATAT < 1:868867/76‑1 GATTTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATC < 1:429551/76‑1 TTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGG > 2:302297/1‑76 TTATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGG > 2:765645/1‑76 TATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGC > 1:417258/1‑76 ATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGCC > 2:1602838/1‑76 ATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGCC < 1:764612/76‑1 ATTCACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGCC > 1:1629050/1‑76 CACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGCCAGC > 1:569969/1‑76 ACTCTTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGCCAGCC < 1:1184752/76‑1 TTCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGCCAGCCATCC > 1:291004/1‑76 TCCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGCCAGCCATCCC > 1:1169188/1‑76 CTAACGCACGGCCAGCCGCAGCTTTAGAGATATCAGCCCCTGCAGCAATCTTGTCGATCAATTGAGATTTATTCACTCTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/433581‑433501‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctcttcCTCTTTATAATTTATATCGCACTTGAATCCTTCAAGGTACGAACGCGCAGCAGTTATATCAGGCCAGCCATCCC < REL606/433495‑433422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |