| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 2,448,493 | IS186 (+) +6 bp | intergenic (+24/+21) | nupC → / ← yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2448493 = | 0 (0.000) | 68 (1.290) | 48/144 | 0.1 | 100% | intergenic (+24/+26) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
| ? | REL606 | = 2774196 | NA (NA) | noncoding (1343/1343 nt) | IS186 | repeat region | |||||
| * | ? | REL606 | = 2448498 | 1 (0.020) | 66 (1.250) | 48/144 | 0.1 | 98.4% | intergenic (+29/+21) | nupC/yfeA | nucleoside (except guanosine) transporter/predicted diguanylate cyclase |
| ? | REL606 | 2772854 = | NA (NA) | noncoding (1/1343 nt) | IS186 | repeat region | |||||
ATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCA > REL606/2772784‑2772924 | aTTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATa < 1:980036/76‑1 (MQ=255) ttttGATTCATCGTGATGACCGTTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATaa < 1:1337083/76‑1 (MQ=255) ttttGATTCATCGTGATGACCGTTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATaa < 1:1337076/76‑1 (MQ=255) ttttGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATaa < 1:66529/76‑1 (MQ=255) tttGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg < 2:515144/76‑1 (MQ=255) tttGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAg < 2:193868/76‑1 (MQ=255) ttaaTTCATCGTGATGACCGGTTTATCCCCGCGGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAgc < 1:695897/73‑1 (MQ=255) tGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAgcg < 1:1531163/76‑1 (MQ=255) ttCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTa < 2:1408975/76‑1 (MQ=255) ttCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTa < 1:1235098/76‑1 (MQ=255) tCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTaa < 1:1233683/76‑1 (MQ=255) tCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACtt < 1:1619170/76‑1 (MQ=255) cGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTa < 2:1612350/76‑1 (MQ=255) cGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTa < 1:1135650/76‑1 (MQ=255) cGTGATGACCGGTTTACCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTa < 1:1125264/76‑1 (MQ=255) gatgaCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAgg > 2:346404/1‑76 (MQ=255) gaCCGGTTTAGCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGtt < 1:626916/76‑1 (MQ=255) aCCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtg < 2:194680/76‑1 (MQ=255) ccGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtgt < 2:1555916/76‑1 (MQ=255) cGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtgtg < 1:1526211/76‑1 (MQ=255) cGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTtgtg > 1:19975/1‑76 (MQ=255) gTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGt < 1:1386759/76‑1 (MQ=255) gTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGt < 1:248953/76‑1 (MQ=255) tATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTACGGGGTGTGGTAtt > 2:1298059/1‑76 (MQ=255) aTCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa > 2:101506/1‑76 (MQ=255) aTCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa > 2:971248/1‑76 (MQ=255) tCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc > 2:1341244/1‑76 (MQ=255) gCTGGCGCGGGGAACACCCTGAACGGTGTGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTg > 1:1574866/1‑76 (MQ=255) tGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGat > 1:84821/1‑76 (MQ=255) tGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGat < 1:1724396/76‑1 (MQ=255) ggCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGata > 1:1612012/1‑76 (MQ=255) gcgcGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat < 2:1318526/76‑1 (MQ=255) gcgcGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat < 2:749509/76‑1 (MQ=255) cgGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAt > 2:668514/1‑76 (MQ=255) ggggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt < 2:61281/76‑1 (MQ=255) ggggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt > 2:389745/1‑76 (MQ=255) ggggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt < 1:1243872/76‑1 (MQ=255) gggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAttt < 1:1359075/76‑1 (MQ=255) ggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa < 2:1157204/76‑1 (MQ=255) ggAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa < 2:1321083/76‑1 (MQ=255) gAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa < 2:944089/76‑1 (MQ=255) gAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa < 2:96050/76‑1 (MQ=255) cacCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGt < 1:1029428/76‑1 (MQ=255) cacCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGt < 1:1382369/76‑1 (MQ=255) acCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTg > 2:477515/1‑76 (MQ=255) cTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg < 1:397122/76‑1 (MQ=255) cTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg < 2:943989/76‑1 (MQ=255) tGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGa > 1:714151/1‑76 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATg > 2:1714536/1‑76 (MQ=255) aaCGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATg > 2:19486/1‑76 (MQ=255) ggTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAt > 1:343332/1‑76 (MQ=255) gTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAtt < 1:816882/76‑1 (MQ=255) gTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAtt > 2:1166731/1‑76 (MQ=255) tGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTa < 1:835105/76‑1 (MQ=40) tGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTa < 2:1379543/76‑1 (MQ=40) tGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGCTATTACGCCTGATATGATTTAACGTGCCGATGAATTa > 1:111415/1‑76 (MQ=255) gggAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAct < 1:1653253/76‑1 (MQ=38) gAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActct < 1:1558279/76‑1 (MQ=34) aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACtctc > 1:1472522/1‑76 (MQ=32) aaaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACtctc > 1:1404189/1‑76 (MQ=32) aaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCa > 2:1209935/1‑76 (MQ=31) aaaaCCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCa > 2:94502/1‑76 (MQ=31) | ATTTTGATTCATCGTGATGACCGGTTTATCCCCGCTGGCGCGGGGAACACCCTGAACGGTGGGGAAAAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCA > REL606/2772784‑2772924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |