| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2036748 = | 93 (1.330) | 4 (0.060) | 4/140 | 7.7 | 4.0% | coding (211/1113 nt) | wbbC | putative glycosyltransferase WbbC |
| ? | REL606 | 2036931 = | 105 (1.610) | coding (28/1113 nt) | wbbC | putative glycosyltransferase WbbC | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTTCACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2036827‑2036748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagATAGTAAATTGAAAACTATTTTCGTCATAAAGGTTTTACTCTTTTAGTCCTAAGTGTGTACTTTAATAAAATAAA > REL606/2036931‑2037005 TGTTCACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTA > 2:200639/1‑76 GTTCACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAA < 1:2027131/76‑1 GTTCACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAA > 2:1022719/1‑76 GTTCACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAA > 2:1022690/1‑76 GTTCACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAA < 1:2027143/76‑1 TTCACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAAA < 1:1375378/76‑1 TCACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAAAA > 2:834300/1‑76 CACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAAAAG < 1:2225186/76‑1 GCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAAAAGATAGTA < 2:1914377/76‑1 GTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAAAAGATAGTAAATTGAAAACTA < 2:1746015/76‑1 TAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAAAAGATAGTAAATTGAAAACTATT < 2:1849819/76‑1 AAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAAAAGATAGTAAATTGAAAACTATTT < 2:257456/76‑1 AAAGATAGTAAATTGAAAACTATTTTCGTCATAAAGGTTTTACTCTTTTAGTCCTAAGTGTGTACTTTAATAAAAT > 1:869151/1‑76 AAAGATAGTAAATTGAAAACTATTTTCGTCATAAAGGTTTTACTCTTTTAGTCCTAAGTGTGTACTTTAATAAAAT > 2:919606/1‑76 AGATAGTAAATTGAAAACTATTTTCGTCATAAAGGTTTTACTCTTTTAGTCCTAAGTGTGTACTTTAATAAAATAA > 2:2099256/1‑76 GATAGTAAATTGAAAACTATTTTCGTCATAAAGGTTTTACTCTTTTAGTCCTAAGTGTGTACTTTAATAAAATAAA < 1:2158414/76‑1 GATAGTAAATTGAAAACTATTTTCGTCATAAAGGTTTTACTCTTTTAGTCCTAAGTGTGTACTTTAATAAAATAAA < 1:2135463/76‑1 TGTTCACCAGGCTAATATCCCTGTTAAAGAATTGTTCAATTTTCCAGAAAACAATAATATTACCTATAATCCTGTAAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2036827‑2036748‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaagATAGTAAATTGAAAACTATTTTCGTCATAAAGGTTTTACTCTTTTAGTCCTAAGTGTGTACTTTAATAAAATAAA > REL606/2036931‑2037005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |