| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2039188 = | 95 (1.360) | 9 (0.140) | 4/140 | 7.7 | 8.0% | coding (507/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | 2039561 = | 119 (1.820) | coding (134/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATA > REL606/2039113‑2039262 | aaCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACa < 1:2026975/76‑1 (MQ=255) aCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACaa > 1:321383/1‑76 (MQ=255) aCCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACaa < 1:505570/76‑1 (MQ=255) cTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAg < 1:1177867/76‑1 (MQ=255) cTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAg < 1:2041882/76‑1 (MQ=255) cTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAg < 1:428508/76‑1 (MQ=255) tGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGt > 2:764451/1‑76 (MQ=255) tGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGt > 1:973443/1‑76 (MQ=255) ggCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGtt > 1:1811003/1‑76 (MQ=255) ggCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGtt < 1:152209/76‑1 (MQ=255) ggCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGtt > 2:1150035/1‑76 (MQ=255) gCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGttt < 2:740561/76‑1 (MQ=255) gCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGttt < 2:2001807/76‑1 (MQ=255) cTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGtttt < 1:1017753/76‑1 (MQ=255) ttCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGtttttt > 1:1099725/1‑76 (MQ=255) ttCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGtttttt < 2:2236310/76‑1 (MQ=255) tCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGttttttt > 2:1910704/1‑76 (MQ=255) cATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTg > 2:1956013/1‑76 (MQ=255) ataataTATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGt > 2:1192911/1‑76 (MQ=255) ataataTATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGt > 2:152162/1‑76 (MQ=255) ataataTATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGt > 2:2087044/1‑76 (MQ=255) ttatatatGTTGCACATGTACTTGGTGCTACTTTCCAATGCCTACTCCCAGACTAAAATATAATACTTTTTTTGtt > 1:753594/3‑76 (MQ=255) aataTATGTTGCATATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGttt < 1:1256943/76‑1 (MQ=255) aataTATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGttt < 1:1256938/76‑1 (MQ=255) aataTATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGttt < 1:1256913/76‑1 (MQ=255) atatatGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGtttt < 1:1056891/76‑1 (MQ=255) tatatGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGttttt > 1:1027716/1‑76 (MQ=255) atatGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTa > 1:930430/1‑76 (MQ=255) atGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtt < 2:586764/76‑1 (MQ=255) tGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAttt < 2:649325/76‑1 (MQ=255) gTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtttt < 2:1714604/76‑1 (MQ=255) tGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtttttt < 2:41887/76‑1 (MQ=255) tGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtttttt < 2:133209/76‑1 (MQ=255) tGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtttttn < 1:104676/76‑2 (MQ=255) gCACATGTGCTTGGTGCTTTTTTCCAATGCCTCCTCCAAAAAAAAAATACAATAGTTTTTTTGTTTTTATTTTTTa < 1:931726/76‑1 (MQ=255) caTGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATg < 2:1222194/76‑1 (MQ=255) aTGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGa < 1:1142107/76‑1 (MQ=255) aTGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGa < 1:1142096/76‑1 (MQ=255) tGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGaa > 1:1085837/1‑76 (MQ=255) tGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGaa < 1:153391/76‑1 (MQ=255) gTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAAt < 2:1604708/76‑1 (MQ=255) gTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAAt < 2:1604690/76‑1 (MQ=255) gTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAAt < 2:1604673/76‑1 (MQ=255) gTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAAt < 1:631365/76‑1 (MQ=255) aCTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCa < 1:1862934/76‑1 (MQ=255) aCTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCa < 2:134094/76‑1 (MQ=255) aCTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCa < 1:1862951/76‑1 (MQ=255) cTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCaa < 2:371201/76‑1 (MQ=255) tGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGa > 2:2203388/1‑76 (MQ=255) ggTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGAt < 2:2038880/76‑1 (MQ=255) gCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGtt < 2:786255/76‑1 (MQ=255) cTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTc < 2:1111052/76‑1 (MQ=255) cTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTc > 2:1458123/1‑76 (MQ=255) tATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTca < 1:402703/76‑1 (MQ=255) tATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTca > 1:1652254/1‑76 (MQ=255) tATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTca < 1:402680/76‑1 (MQ=255) tATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTca > 1:2044066/1‑76 (MQ=255) tATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTca < 2:817716/76‑1 (MQ=255) tATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTca > 1:1524860/1‑76 (MQ=255) naTTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTca > 1:26859/2‑76 (MQ=255) aTTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTcac < 1:2222489/76‑1 (MQ=255) ttCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAat < 2:1824439/76‑1 (MQ=255) tCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAata < 2:298672/76‑1 (MQ=255) tgaaTGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAatat > 2:621188/3‑76 (MQ=255) ccAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAatat > 1:147941/1‑76 (MQ=255) gaaTGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATAtt > 2:1276694/2‑76 (MQ=255) gaaTGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATAtt > 2:2232585/2‑76 (MQ=255) gaaTGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATAtt > 2:2232575/2‑76 (MQ=255) gaaTGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATAtt > 2:1287809/2‑76 (MQ=255) cAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATAtt < 1:383942/76‑1 (MQ=255) aaTGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTc < 1:30419/76‑1 (MQ=255) gCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACt < 1:684089/76‑1 (MQ=255) gCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACt < 1:2156701/76‑1 (MQ=255) cTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACtat > 2:722180/1‑76 (MQ=255) tACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACtata > 1:2183176/1‑76 (MQ=255) tACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACtata < 2:943538/76‑1 (MQ=255) tACTCCCAGAATAAAATACAATAGGTTTTTTGTTTTTATTTTTTAATGAAGCAAGATGTTCACAATATTCACtata < 2:943525/76‑1 (MQ=39) aCTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTatat > 2:1257749/1‑76 (MQ=255) cTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATAtt < 2:741294/76‑1 (MQ=255) cccAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTa < 2:729096/76‑1 (MQ=255) ccAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTAt > 1:1383402/1‑76 (MQ=255) cAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATc > 2:72291/1‑76 (MQ=255) aGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCt < 1:204232/76‑1 (MQ=255) gAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTg > 1:2147364/1‑76 (MQ=255) gAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTg > 1:2147371/1‑76 (MQ=255) gAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTg < 1:2105202/76‑1 (MQ=255) aTAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGga < 1:186616/76‑1 (MQ=255) aTAAAATACAATAGTTTGTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGga < 1:186597/76‑1 (MQ=255) tAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgat > 1:527223/1‑76 (MQ=255) aaaTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgatga < 1:2227052/76‑1 (MQ=255) aaTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgatgat > 2:973765/1‑76 (MQ=255) tACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCa > 1:766863/1‑76 (MQ=255) ccaaaTAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCa > 2:2020602/4‑76 (MQ=255) aCAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCAt > 2:1146259/1‑76 (MQ=255) aCAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCAt > 2:1146240/1‑76 (MQ=255) cAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATa < 1:1251195/76‑1 (MQ=255) | AACCCTGGCTTTCATAATATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATA > REL606/2039113‑2039262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |