| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 1,881,180 | Δ10 bp | coding (554‑563/972 nt) | manX → | fused mannose‑specific PTS enzymes: IIA component/IIB component |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1881179 | 3 (0.050) | 54 (0.830) | 44/150 | 0.4 | 94.7% | coding (553/972 nt) | manX | fused mannose‑specific PTS enzymes: IIA component/IIB component |
| ? | REL606 | 1881190 = | 3 (0.050) | coding (564/972 nt) | manX | fused mannose‑specific PTS enzymes: IIA component/IIB component | |||||
TACATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1881107‑1881179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAGGTTGCA > REL606/1881190‑1881262 TACATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTC < 1:611215/76‑1TACATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTC > 1:391520/1‑76 ACATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCC > 1:986034/1‑76 ACATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCC > 1:865657/1‑76 CATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCC > 2:206448/1‑76 ATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCG > 1:1744885/1‑76 TGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGT < 2:470340/76‑1 TTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATT > 2:1349204/1‑76 TTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATT > 2:1173832/1‑76 TTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATT < 2:1748466/76‑1 TATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATca > 2:496211/1‑74 TATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTA > 1:622595/1‑76 TATTGGCCTTGCGCGTATCGACGACCGTCTGATTCAC‑GTCAGGTCGCCACCCGCTGGACGAAAGCTCCCGTATTAT < 1:472436/76‑1 TGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTG < 2:464025/76‑1 CCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTG > 2:1290300/1‑76 CTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGT < 2:1749227/76‑1 CTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGT > 2:81629/1‑76 CTTGCGCGTATCGACGACCGTCTGATTCACGGCAAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGT > 2:779805/1‑76 TGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTA > 1:490574/1‑76 CGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGA > 1:853281/1‑76 GTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGAT > 1:1370092/1‑76 CGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGG > 2:645634/1‑76 GACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGC > 2:1644193/1‑76 GACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGC < 2:2023278/76‑1 GACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGC > 2:751608/1‑76 nCCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCT > 1:272620/2‑76 CGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGC < 2:606885/76‑1 CTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGA > 1:1143604/1‑76 TGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGAT < 2:227633/76‑1 TGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGAT > 2:198733/1‑76 ACGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTT > 1:1358020/1‑76 CGGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTC < 1:645873/76‑1 GGTCAGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCG < 2:503128/76‑1 AGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAG < 1:1655508/76‑1 AGGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAG > 2:1570711/1‑76 GGTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGA > 1:1956994/1‑76 GTCGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGAC < 2:1441369/76‑1 CGCCACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACAC > 1:1518506/1‑76 CACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGC > 2:487208/1‑76 ACCCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCT > 2:1759258/1‑76 CCGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCA > 2:146228/1‑76 CGCTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCAC < 1:1699175/76‑1 CTGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCC > 1:1967178/1‑76 TGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCA > 1:12384/1‑76 TGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCA > 2:1665469/1‑76 TGGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACAACGCTCACCCA > 2:306567/1‑76 GGACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAG > 2:1229415/1‑76 GACCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGCGCGTAAGACACTGCTCCCCCAGG > 2:794632/1‑76 CCAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAGGTT < 1:1783562/76‑1 CAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAGGTTG < 1:598751/76‑1 CAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAGGTTG < 1:1485163/76‑1 CAAAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAGGCTG > 2:871179/1‑76 AAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCCGGTTGCA > 1:1290648/1‑76 AAGCTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAGGTTGCA > 2:1504363/1‑76 TACATGGTTATTGGCCTTGCGCGTATCGACGACCGTCTGATTCACGGTCAGGTCGCCACCCGCTGGACCAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1881107‑1881179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCCGTATTATTGTTGTTAGTGATGAAGTGGCTGCGGATACCGTTCGTAAGACACTGCTCACCCAGGTTGCA > REL606/1881190‑1881262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |