| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 4201708 | 82 (1.280) | 3 (0.050) | 3/136 | 7.9 | 3.9% | intergenic (‑290/+27) | arpA/iclR | regulator of acetyl CoA synthetase; ankyrin‑like regulatory protein; b4017_1/DNA‑binding transcriptional repressor |
| ? | REL606 | = 4201716 | 74 (1.280) | intergenic (‑298/+19) | arpA/iclR | regulator of acetyl CoA synthetase; ankyrin‑like regulatory protein; b4017_1/DNA‑binding transcriptional repressor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGACATTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATC > REL606/4201633‑4201783 | tGACATTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGa > 2:1981080/1‑76 (MQ=255)tGACATTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGa > 1:1789904/1‑76 (MQ=255) gACATTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGaa > 2:1261205/1‑76 (MQ=255) gACATTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGaa > 1:29983/1‑76 (MQ=255) aCATTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAat < 2:87721/76‑1 (MQ=255) cATTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAata > 2:905642/1‑76 (MQ=255) cATTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAata < 1:394476/76‑1 (MQ=255) aTTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAatat < 2:71963/76‑1 (MQ=255) aTTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAatat > 1:866366/1‑76 (MQ=255) ttAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATAtt < 1:467360/76‑1 (MQ=255) tAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTg > 1:420128/1‑76 (MQ=255) gTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCct < 1:1101391/76‑1 (MQ=255) ttATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCctc > 2:1009919/1‑76 (MQ=255) ttATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCctc < 2:4421/76‑1 (MQ=255) ttATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCctc > 1:47086/1‑76 (MQ=255) tATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCctct < 1:62381/76‑1 (MQ=255) tATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCctct < 1:583620/76‑1 (MQ=255) aTTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTg > 1:920529/1‑76 (MQ=255) aTTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTg > 1:737621/1‑76 (MQ=255) ttCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGc < 2:1785134/76‑1 (MQ=255) tGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCg < 2:1143254/76‑1 (MQ=255) gtcGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGc > 1:896016/3‑76 (MQ=255) ggCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGc > 2:499890/1‑76 (MQ=255) ggCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGc < 2:1907253/76‑1 (MQ=255) gCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGcc > 2:830363/1‑76 (MQ=255) cGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCa > 2:1489832/1‑76 (MQ=255) cAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGaa < 1:1132712/76‑1 (MQ=255) cAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGaa > 1:219038/1‑76 (MQ=255) cGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGt < 1:1172174/76‑1 (MQ=255) gATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTc > 2:1403695/1‑76 (MQ=255) gATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTc < 2:1176858/76‑1 (MQ=255) aTTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCa < 2:866366/76‑1 (MQ=255) aTTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCa < 2:1642451/76‑1 (MQ=255) aTTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCa < 2:1050054/76‑1 (MQ=255) aTTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCa < 2:1642428/76‑1 (MQ=255) aTTAACAGACACCCTTATTATATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCa > 2:152832/1‑76 (MQ=255) ttAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAg < 2:1264571/76‑1 (MQ=255) ttAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAg < 2:418679/76‑1 (MQ=255) tAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAgc > 1:1390125/1‑76 (MQ=255) aaCAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAgcg < 2:170884/76‑1 (MQ=255) aaCAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAgcg > 1:578718/1‑76 (MQ=255) aaCAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAgcg > 1:1480418/1‑76 (MQ=255) aGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCAt < 1:1162996/76‑1 (MQ=255) aGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCAt < 2:176307/76‑1 (MQ=255) gACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCAtt < 1:1680380/76‑1 (MQ=255) ncacCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTc > 1:1799578/2‑76 (MQ=255) acacCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTc < 2:1668270/76‑1 (MQ=255) acCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCa > 1:116507/1‑76 (MQ=255) cTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCg < 1:669974/76‑1 (MQ=255) tATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTa > 2:783065/1‑76 (MQ=255) aTTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTAc < 2:767930/76‑1 (MQ=255) aTTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTAc < 1:2006611/76‑1 (MQ=255) ttCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACg > 1:465811/1‑76 (MQ=255) tCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGc > 1:697241/1‑76 (MQ=255) tCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGc > 2:1472538/1‑76 (MQ=255) tCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGc < 2:18720/76‑1 (MQ=255) cTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGcc > 1:496585/1‑76 (MQ=255) cTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGcc < 1:816690/76‑1 (MQ=255) tATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCa < 1:2004177/76‑1 (MQ=255) aTTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAg < 2:494989/76‑1 (MQ=255) aTTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAg > 1:1686088/1‑76 (MQ=255) tGCCCCTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCg < 2:385561/76‑1 (MQ=255) tGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCg > 1:1026205/1‑76 (MQ=255) gCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACTCCAGCGt > 1:855211/1‑76 (MQ=255) gCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGt < 1:495773/76‑1 (MQ=255) gCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGt < 1:1647760/76‑1 (MQ=255) ccACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTc < 1:687245/76‑1 (MQ=255) aCTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAGAAGTCAGCGCATTCCACCGTACGCCAGCGTCAc < 2:1361615/76‑1 (MQ=255) aCTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCAc > 2:1607533/1‑76 (MQ=255) cTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCAct > 1:683904/1‑76 (MQ=255) tCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCActt < 2:750266/76‑1 (MQ=255) tCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCActt < 2:975818/76‑1 (MQ=255) gTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCActtcctt > 2:143562/1‑76 (MQ=255) gTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCActtcctt > 1:1672106/1‑76 (MQ=255) gTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCActtcctt > 1:1715558/1‑76 (MQ=255) tATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCActtccttc > 2:420032/1‑76 (MQ=255) tATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCActtccttc > 2:1154185/1‑76 (MQ=255) tATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCActtccttc > 1:740010/1‑76 (MQ=255) gatgGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTcgcc < 2:1622241/76‑1 (MQ=255) aGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTaa < 2:447430/76‑1 (MQ=255) aGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTaa < 1:1452416/76‑1 (MQ=255) aaTATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATc > 2:2022320/1‑76 (MQ=255) aaTATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATc < 2:1618972/76‑1 (MQ=255) aaTATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATc > 1:320926/1‑76 (MQ=255) | TGACATTAAGTTATTCTGGCGTCAATACGATTAACAGACACCCTTATTCTATTGCCACTCAGGTATGATGGGCAGAATATTGCCTCTGCCCGCCAGAAAAAGTCAGCGCATTCCACCGTACGCCAGCGTCACTTCCTTCGCCGCTTTAATC > REL606/4201633‑4201783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |