New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 2840545111 (1.770)4 (0.110)
+TAGAGCGTAACTGCAATGAATTGTGCCCAT
4/90 5.1 6.8% intergenic (‑84/+155) ygdL/mltA hypothetical protein/membrane‑bound lytic murein transglycosylase A
?REL606 2898279 = 72 (1.150)intergenic (+131/+90) yqeA/yqeB predicted amino acid kinase/conserved protein with NAD(P)‑binding Rossman fold
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACGCTTATCAGGCCTACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2840526‑2840545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTAGGCCTGATAAGCGTA  >  REL606/2898279‑2898298
                    ||||||||||||||||||||||||||||||                    
TACGCTTATCAGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTA  <  1:1504802/70‑1
TACGCTTATCAGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTA  >  2:1504802/1‑70
         CAGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTG           <  1:543610/52‑1
         CAGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTG           >  2:543610/1‑52
                    ||||||||||||||||||||||||||||||                    
TACGCTTATCAGGCCTACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2840526‑2840545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTGTAGGCCTGATAAGCGTA  >  REL606/2898279‑2898298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.