| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2840545 | 111 (1.770) | 4 (0.110) +TAGAGCGTAACTGCAATGAATTGTGCCCAT |
4/90 | 5.1 | 6.8% | intergenic (‑84/+155) | ygdL/mltA | hypothetical protein/membrane‑bound lytic murein transglycosylase A |
| ? | REL606 | 2898279 = | 72 (1.150) | intergenic (+131/+90) | yqeA/yqeB | predicted amino acid kinase/conserved protein with NAD(P)‑binding Rossman fold | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAT > REL606/2898204‑2898354 | ttgttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACt > 1:1065022/1‑76 (MQ=255)ttgttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACt < 1:1310158/76‑1 (MQ=255)ttgttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACt < 1:1651364/76‑1 (MQ=255) gttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTg < 1:111347/76‑1 (MQ=255) gttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTg > 1:640686/1‑76 (MQ=255) ttgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGt < 1:478737/76‑1 (MQ=255) tgATGCCGGATGCGGCGCGAGCGCCTTTTCCTTCCTACAAAACATCGCAAAATCAATAGATTGCAATGCACTTGTa > 1:1068041/1‑76 (MQ=25) tgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTa < 1:428329/76‑1 (MQ=255) tgATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTa < 1:428312/76‑1 (MQ=255) aTGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAgg < 2:1512564/76‑1 (MQ=255) tGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGc > 2:1184432/1‑76 (MQ=255) ccGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCt < 1:998055/76‑1 (MQ=255) ccGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCt < 1:1378458/76‑1 (MQ=255) cGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTg > 1:1948532/1‑76 (MQ=255) cGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTg > 2:823324/1‑76 (MQ=255) gATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGAt > 1:809800/1‑76 (MQ=255) aTGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATa > 1:1540771/1‑76 (MQ=255) aTGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATa < 1:363416/76‑1 (MQ=255) tGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATaa < 2:1825923/76‑1 (MQ=255) tGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATaa < 1:334471/76‑1 (MQ=255) cggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGc < 2:1432619/76‑1 (MQ=255) gcgcGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGt > 1:1153487/1‑76 (MQ=255) gcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAg > 1:1668546/1‑76 (MQ=255) gcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAg < 2:627534/76‑1 (MQ=255) gcgAGCGCCTTATCCGTCCAACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAg < 1:1584063/76‑1 (MQ=255) gAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAgcg > 2:1066731/1‑76 (MQ=255) gcCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATc < 1:1914177/76‑1 (MQ=255) ccTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCa > 1:195258/1‑76 (MQ=255) cTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAg > 1:865645/1‑76 (MQ=255) ttATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAgg > 1:931771/1‑76 (MQ=255) tATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:39498/1‑76 (MQ=255) tATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:561629/1‑76 (MQ=255) tATCCGTCATAAAAAACATCGAAAATTAAATAGATTGCAATGCATTTGTAGGCCTGATAAGCGTAGCGCATCGGGc < 2:700284/76‑1 (MQ=21) aTCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa < 2:1962252/76‑1 (MQ=255) ccGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAt < 2:451771/76‑1 (MQ=255) gTCCTACAAAACATCACAAATTCAATAGATTGCAATGCACTTGAAGGCCTGATAAGCGTAGCGCATCAGGCAAttt < 2:1496832/76‑1 (MQ=255) ccTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTgg < 2:452962/76‑1 (MQ=255) ccTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTgg > 2:1144698/1‑76 (MQ=255) cTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGc < 2:642946/76‑1 (MQ=255) tACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCg > 2:57481/1‑76 (MQ=255) aCAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGt > 2:1619749/1‑76 (MQ=255) aCAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGt > 2:872981/1‑76 (MQ=255) cAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGtt < 2:698805/76‑1 (MQ=255) cAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGtt > 1:352987/1‑76 (MQ=255) aaaCATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTg < 2:1425867/76‑1 (MQ=255) aaaCATCAAAAATTCAATAGATTGCAAGGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTg < 2:523395/76‑1 (MQ=18) aaCATCGCAAATTCAATAGGTGGCAGTGCACTTGTAGGCGTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGt < 2:1087345/76‑1 (MQ=18) aaCATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGt < 2:1536872/76‑1 (MQ=255) cATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGtca > 2:436066/1‑76 (MQ=255) tCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAGGCGTAGCGCATCGGGCAATTTGGCGTTTGtcatc < 1:1973053/76‑1 (MQ=255) cGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGtcatca < 2:1170168/76‑1 (MQ=255) gCAAATTCAATAGATTGCAATGCGCTTGTGGGGCTGATAAGGGTAGGGCATGAGGCAATTTGGCGTTTGTCATCAg < 2:257759/76‑1 (MQ=18) cAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGt > 2:272886/1‑76 (MQ=255) aaaTTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGtc < 2:1796451/76‑1 (MQ=255) tCAATAGATTGCAATGCATTTGTAGGCCGGATAAGCGGGGCGCATAGGGCAATTTGGCGTTTGTCATCAGTCTCAg < 1:70091/76‑1 (MQ=18) tCAATAGATGGAAATGCACTTGTAGGCGTGATAGGCGTAGCGCATCGGGCAATTTGGCGTTTGTCATCAGTCTCAg < 2:563125/76‑1 (MQ=18) acnaGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGc > 2:1394525/4‑76 (MQ=255) aaTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGc > 1:611716/1‑76 (MQ=255) aTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGcc > 2:1374024/1‑76 (MQ=255) aGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgg > 1:1211214/1‑76 (MQ=255) ttGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtg > 2:388007/1‑76 (MQ=255) ttGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtg > 2:860711/1‑76 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCGgggggg > 2:1281850/1‑76 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtgg > 2:1581714/1‑76 (MQ=255) tGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtgg < 1:1746659/76‑1 (MQ=255) cAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtgggt > 2:787435/1‑76 (MQ=255) cAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCgggtgggt > 2:1768944/1‑76 (MQ=255) agtGCACTTGTAGGCCTGATAGGGGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTa < 2:1382212/74‑1 (MQ=21) aaTGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGGGGGTa > 2:1019166/1‑76 (MQ=255) cACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATAc < 1:274260/76‑1 (MQ=255) cACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATAc < 1:282349/76‑1 (MQ=255) cACTTGTAGGCCTGATAAGCGTAGCGCAGCAGGCAATTTTGCGTTTGTCGTCAGTCTCAGGCCGGGGGGGAAATAc > 2:1658936/1‑76 (MQ=17) ttGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAt > 1:1813957/1‑76 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAt < 2:47976/76‑1 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAt > 1:1032601/1‑76 (MQ=255) ttGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGGAATACCAt > 1:1597040/1‑76 (MQ=255) | TTGTTGATGCCGGATGCGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACCAT > REL606/2898204‑2898354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |