| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2039202 = | 44 (0.700) | 3 (0.060) | 3/130 | 7.7 | 4.9% | coding (493/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | 2039549 = | 78 (1.430) | coding (146/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGGGATATGGCAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2039281‑2039202‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaataaaaGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTA > REL606/2039549‑2039623 ATGGGATATGGCAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAAT > 2:78489/1‑76ATGGGATATGGCAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAAT > 1:531560/1‑76 TGGGATATGGCAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATA > 1:243563/1‑76 TGGGATATGGCAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATA < 2:1246687/76‑1 GGGATATGGCAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAA > 1:514926/1‑76 GGGATATGGCAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAA < 2:1671934/76‑1 GATATGGCAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAA < 2:352723/76‑1 CAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAA < 1:638314/68‑1 CAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAA > 2:638313/1‑68 GCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAGTAAATGCTAT < 2:574545/76‑1 ATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAGTAAATGCTATTTGGT < 2:502257/76‑1 CCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAAGTAAATGCTATTTGGTCTTTATAT < 2:1995561/76‑1 AAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTT > 2:1073301/1‑76 AAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTC > 2:1465583/1‑76 TAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATG > 2:1886797/1‑76 TAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATG > 2:618829/1‑76 TAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATG < 1:1509033/76‑1 AGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTA > 1:1470140/1‑76 AGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTA > 2:1319874/1‑76 ATGGGATATGGCAACGCTTTATGATCATCCAGATAAATATAGTGAATATTGTGAACATCTTGATTCATTAAAAAATAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2039281‑2039202‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaataaaaGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATAAGATTTATAAAACAATTTTCATGACTA > REL606/2039549‑2039623 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |