| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2039202 = | 44 (0.700) | 3 (0.060) | 3/130 | 7.7 | 4.9% | coding (493/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | 2039549 = | 78 (1.430) | coding (146/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATC > REL606/2039130‑2039277 | tatatGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGttttt < 2:885425/76‑1 (MQ=255)tatatGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGttttt < 2:885418/76‑1 (MQ=255) atatGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTa > 1:1909280/1‑76 (MQ=255) atatGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTa > 1:1909273/1‑76 (MQ=255) tatGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAt > 1:790998/1‑76 (MQ=255) atGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtt < 2:1598604/76‑1 (MQ=255) tGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAttt > 1:849732/1‑76 (MQ=255) gTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtttt < 2:496529/76‑1 (MQ=255) tGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtttttt > 1:1268394/1‑76 (MQ=255) tGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTAtttttt > 1:1268424/1‑76 (MQ=255) acaTGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAAt < 1:334043/76‑1 (MQ=255) naTGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATg > 1:681703/2‑76 (MQ=255) caTGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATg < 1:760101/76‑1 (MQ=255) tGTAGTTGGTGCTATTTTCCAATGCCTACGCGCAGAATAGAATGCAATAGTGTTTTTGTTTTTATGTTTTAATGaa < 1:1268244/76‑1 (MQ=255) gTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAAt < 1:791146/76‑1 (MQ=255) tACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATc > 1:1898572/1‑76 (MQ=255) aCTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCa < 1:1574628/76‑1 (MQ=255) tGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGa > 1:1809503/1‑76 (MQ=255) gTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATg < 2:1345664/76‑1 (MQ=255) nttttCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTcac > 1:1145741/2‑76 (MQ=255) ttttCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTcaca < 2:117341/76‑1 (MQ=255) tCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAata < 1:1825200/76‑1 (MQ=255) tCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAata > 2:829041/1‑76 (MQ=255) aTGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCa > 2:139916/1‑76 (MQ=255) ccTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACta > 1:1196613/1‑76 (MQ=255) cTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACtat > 1:1339973/1‑76 (MQ=255) aCTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTatat > 1:920241/1‑76 (MQ=255) ccAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCACCCTGTTCACAATATTCACTATATTTAt > 1:410081/1‑76 (MQ=39) cAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATc < 1:1232730/76‑1 (MQ=255) aGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCt < 2:1992664/76‑1 (MQ=255) gAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTg < 2:919097/76‑1 (MQ=255) aTAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGga > 1:1433710/1‑76 (MQ=255) tAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgat < 1:7431/76‑1 (MQ=255) aaaaTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgatg > 2:1051972/1‑76 (MQ=255) aaaTACAATAGTTTTTTTGTTTTTATTTTATAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGgatga > 1:1835749/1‑76 (MQ=255) aTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATc < 2:1186311/76‑1 (MQ=255) aTACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATc < 2:1186307/76‑1 (MQ=255) aCAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCAt < 2:1538577/76‑1 (MQ=255) aaTAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATaa < 2:1522203/76‑1 (MQ=255) aTAGTTTTTTTGTTTTTATTTTTTAATGAATCAAAATGTTCACAATATTCACTATATTTATCTGGATGATCATaaa > 1:1729964/1‑76 (MQ=255) tttttGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTg > 1:1535834/1‑76 (MQ=255) tttGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGcc > 1:1743115/1‑76 (MQ=255) ttGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCa < 2:1592287/76‑1 (MQ=255) ttGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCa < 1:361244/76‑1 (MQ=255) ttttATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATc > 2:352723/1‑76 (MQ=255) | TATATGTTGCACATGTACTTGGTGCTATTTTCCAATGCCTACTCCCAGAATAAAATACAATAGTTTTTTTGTTTTTATTTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATC > REL606/2039130‑2039277 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |