| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 2,563,623 | +GTAG | coding (41/1014 nt) | yfgA ← | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2563618 | 1 (0.020) | 56 (0.900) +GGTA |
41/132 | 0.3 | 98.3% | coding (46/1014 nt) | yfgA | hypothetical protein |
| ? | REL606 | 2563619 = | 1 (0.020) | coding (45/1014 nt) | yfgA | hypothetical protein | |||||
TTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTG > REL606/2563545‑2563692 | ttCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCgg > 1:968586‑M1/1‑74 (MQ=255) tCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggt < 2:1086989‑M1/76‑4 (MQ=255) tCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggt < 2:1299965‑M1/76‑4 (MQ=255) tCAGGCAAAGCCGCGCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggt < 2:548441‑M1/76‑4 (MQ=255) cAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggta < 1:1860198‑M1/76‑5 (MQ=255) aGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtag < 2:500996‑M1/76‑6 (MQ=255) aGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtag > 2:1172512‑M1/1‑71 (MQ=255) cAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggta > 2:1206069‑M1/1‑68 (MQ=255) aGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagta > 2:313762‑M1/1‑65 (MQ=255) aGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagta > 2:1337935‑M1/1‑65 (MQ=255) cGCTCGGCAACGGTCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtagggagtaagt > 2:571503‑M1/1‑62 (MQ=255) cGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagt > 2:2046940‑M1/1‑62 (MQ=255) gCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtg < 2:1571116‑M1/76‑16 (MQ=255) cGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgctt > 2:440962‑M1/1‑58 (MQ=255) cGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgctt > 1:1008505‑M1/1‑58 (MQ=255) gCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCagtaggtagtaagtgcttca < 2:1078815‑M1/76‑21 (MQ=255) aaCGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcatt > 2:38307‑M1/1‑54 (MQ=255) aCGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattt > 1:1506405‑M1/1‑53 (MQ=255) aCGCCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattt < 1:1155006‑M1/76‑24 (MQ=255) cGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcatttt > 2:356481‑M1/1‑52 (MQ=255) ccTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTcgtg > 2:1862157/1‑76 (MQ=255) ctgctgACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtc > 1:699250‑M1/1‑48 (MQ=255) tgAGTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgc > 1:317188‑M1/1‑44 (MQ=255) tgACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttgatcgtgc > 1:1292885‑M1/1‑44 (MQ=255) gACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcg > 2:963363‑M1/1‑43 (MQ=255) gACGAAGTCCTAGTGGTTCGCGAGCATTACGCGGGCGGGCGCCggtaggtagtaagtgcttcattttggtcgtgcg < 1:475856‑M1/76‑34 (MQ=255) aCTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgt > 2:1361659‑M1/1‑42 (MQ=255) tAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtgg < 1:1462833‑M1/76‑37 (MQ=255) tAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtgg > 1:1537366‑M1/1‑40 (MQ=255) tAAGGCCTAGTTGTTCGCGAGAATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtgg < 1:1462844‑M1/76‑37 (MQ=255) aaGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggc > 1:1160389‑M1/1‑39 (MQ=255) aaGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggc > 2:1402764‑M1/1‑39 (MQ=255) cTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcag > 2:915321‑M1/1‑34 (MQ=255) tAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagt < 2:1828786‑M1/76‑44 (MQ=255) aGTTGTTCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagta > 1:2002582‑M1/1‑32 (MQ=255) gttgttCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtat > 2:683727‑M1/1‑31 (MQ=255) ttgttCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtatt > 2:1665219‑M1/1‑30 (MQ=255) ttgttCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtatt < 2:473948‑M1/76‑47 (MQ=255) ttgttCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtatt > 1:733928‑M1/1‑30 (MQ=255) gttCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattca > 1:1416800‑M1/1‑28 (MQ=255) gttCGCGAGATTTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattca < 1:1264586‑M1/76‑49 (MQ=255) ttCGCGAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcat > 2:1411191‑M1/1‑27 (MQ=255) gAGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgct > 2:182295‑M1/1‑22 (MQ=255) aGCATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctg < 2:1431652‑M1/76‑56 (MQ=255) gCATTACGCGGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgc < 1:1635490‑M1/76‑57 (MQ=255) cATTACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgggcggggcttcagtattcattcgctgcc > 1:1157382‑M1/1‑19 (MQ=255) ttACGCGGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcagg < 1:574896‑M1/76‑60 (MQ=255) ttACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcagg > 2:192372‑M1/1‑17 (MQ=255) tACGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcaggt > 1:778289‑M1/1‑16 (MQ=255) cgcgGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcttggcttcagtattcattcgctgcaggtac < 2:54698‑M1/76‑63 (MQ=255) cgcgGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcaggtac < 2:69807‑M1/76‑63 (MQ=255) cGCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcaggtac < 2:614167‑M1/76‑63 (MQ=255) gCAGGCGAGCGCCggtaggtagtaagtgtttcattttggtcgtgcgtggcttcagtattcattcgctgcaggtacg > 1:1404722‑M1/1‑13 (MQ=255) gCAGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcaggtacg > 1:1712752‑M1/1‑13 (MQ=255) aGGCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcaggtacgtt > 2:1470879‑M1/1‑11 (MQ=255) gCGAGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcaggtacgttta > 2:1865936‑M1/1‑9 (MQ=255) aGCGCCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcaggtacgtttaaat < 2:1691844‑M1/76‑71 (MQ=255) gcgcCggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcaggtacgtttaaatg < 1:360189‑M1/76‑72 (MQ=255) ccggtaggtagtaagtgcttcattttggtcgtgcgtggcttcagtattcattcgctgcaggtacgtttaaatgaga > 2:1099464‑M1/1‑2 (MQ=255) | TTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTG > REL606/2563545‑2563692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |