| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 2,100,308 | Δ22,146 bp | ogrK–[ECB_02013] | 27 genes ogrK, yegZ, ECB_01989, ECB_01990, ECB_01991, ECB_01992, ECB_01993, ECB_01994, ECB_01995, ECB_01996, ECB_01997, ECB_01998, ECB_01999, ECB_02000, ECB_02001, ECB_02002, ECB_02003, ECB_02004, ECB_02005, ECB_02006, ECB_02007, ECB_02008, ECB_02009, ECB_02010, ECB_02011, ECB_02012, [ECB_02013] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 2100308 | 2122453 | 22146 | 56 [0] | [1] 55 | ogrK–[ECB_02013] | ogrK,yegZ,ECB_01989,ECB_01990,ECB_01991,ECB_01992,ECB_01993,ECB_01994,ECB_01995,ECB_01996,ECB_01997,ECB_01998,ECB_01999,ECB_02000,ECB_02001,ECB_02002,ECB_02003,ECB_02004,ECB_02005,ECB_02006,ECB_02007,ECB_02008,ECB_02009,ECB_02010,ECB_02011,ECB_02012,[ECB_02013] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2100307 | 0 (0.000) | 33 (0.940) | 27/104 | 0.2 | 98.5% | intergenic (+171/+102) | yegQ/ogrK | predicted peptidase/phage DNA‑binding transcriptional regulator |
| ? | REL606 | 2122454 = | 1 (0.030) | coding (172/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein | |||||
TCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2100210‑2100307‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccttacacgggcttattttttTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC > REL606/2122454‑2122527 TCATCCGTTTCGCTGAAAAACATAACCCATTAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCT < 1:36497/76‑1TCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCT < 1:717499/76‑1TCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCT > 2:1566335/1‑76TCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTCTACCAGGAACCACCTCCTTAGACTGTCTATTCT < 1:1566285/76‑1 CATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTC > 1:747255/1‑76 ATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACNTCCTTAGCCTNTGTCATCTCC < 2:1688816/76‑1 TCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCC > 2:1076932/1‑76 CCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCT > 1:965192/1‑76 CCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGCGTAATCTCCCT > 2:78158/1‑76 CGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTT > 2:587803/1‑76 CGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTT > 1:949503/1‑76 CGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTT < 2:506588/76‑1 TTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTAC < 1:491049/76‑1 TTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACA > 1:381823/1‑76 TCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACAC > 1:540124/1‑76 CGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACG > 1:968614/1‑76 CGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACG > 1:968596/1‑76 CTGAAAAACATAACCCATAAAATGCTAGCTTTACCAGGAACCCCCTCCTTAGCCTGTGTAATCTCCCTTACACGGG < 1:843507/76‑1 CTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGG < 1:1069633/76‑1 AAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTT < 2:343909/76‑1 AAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTT > 1:176222/1‑76 AAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTT < 2:1287064/76‑1 AAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTT < 2:1412535/76‑1 AAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTT < 2:1426827/76‑1 AAAACATAACCTATAACATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTA > 1:91385/1‑76 AAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTAT < 2:1242167/76‑1 AAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTAT > 2:1580882/1‑76 AAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACATCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTAT > 2:543894/1‑76 CATAACCCATAAAATGCTAGCTCTACCAGGAACCACCTCCTTAGCCTGTGTAATCGCCCTTACACGGGCTTATTTT < 2:144997/76‑1 TAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTT > 2:482371/1‑76 TAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTT > 1:1121898/1‑76 AACCCATAAAATNCTNGCTGTACCAGGAACCACCNCCTTAGACTGTGTAATCTCCCTTACACGGGCTTATTTTTTT < 1:1405879/76‑1 AACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTT > 2:1445785/1‑76 ATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCA > 2:57541/1‑76 ATAAAATGCTAGCTATACCTGGAACCACCGCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTATTTATGCA < 2:23699/76‑1 AAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATA < 2:1546117/76‑1 aagGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAG < 1:1098273/73‑1 AATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAG > 1:847968/1‑76 AATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAG < 1:919121/76‑1 AATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAG < 1:919136/76‑1 AATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAG < 1:1099290/76‑1 ATGCTAGCTGTTCCAGGAACCCCCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGC < 1:783482/76‑1 GCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCC < 2:1256869/76‑1 CTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCT > 1:1300353/1‑76 TAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTA > 1:635556/1‑76 AGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTAT > 2:228430/1‑76 AGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTAT > 2:930627/1‑76 CAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTA < 1:116427/76‑1 CAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCGGGTA < 1:122179/76‑1 AGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAA > 2:546679/1‑76 GAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACC < 1:742279/76‑1 CCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCAT < 2:1424554/76‑1 TAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGA > 2:1469756/1‑76 TAGCCTGNGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGA > 2:1378104/1‑76 CCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCA > 1:799335/1‑76 TGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACA < 2:714046/76‑1 TGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATC < 2:499135/76‑1 GTAATGTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCTTTGACCACATCG < 2:72604/76‑1 GTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCG > 1:325935/1‑76 TAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGA > 2:910249/1‑76 AATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGAT > 1:807559/1‑76 TCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAG > 1:123418/1‑76 TCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAG < 2:1122522/76‑1 CTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTGTGGTAACCGTCTTCCATTGACTACATCGATAGA < 1:1566337/76‑1 CCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAAT > 1:784831/1‑76 CCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCAATAGAATC < 1:1327976/76‑1 TTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACTGTCTTCCATTGACCACATCGATAGAATCCT > 1:888166/1‑76 TTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCT > 1:1239906/1‑76 TTACACGGGCCTATTTTGTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCAGATCGATAGAATCCT > 1:139773/1‑76 TACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTC > 1:1389495/1‑76 TACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTC < 2:436119/76‑1 TACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTC > 1:803611/1‑76 CGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTC > 2:1060859/1‑76 GGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCA > 2:959904/1‑76 GCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATA < 1:641077/76‑1 GCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATA < 1:45477/76‑1 cgTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATTCTCCTTCATAG < 1:41667/74‑1 TTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACG > 2:99383/1‑76 TTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAG > 2:1432624/1‑57 TTTTTTTATGCATAAGCCCGATCTCTGGTAACCGTCTTCCATTGACCACATCGATAG < 1:1432626/57‑1 TTTTTTATGCANAANCCCTATCTCTGATAACCGTCTTCCATTGACCACATCGATAGAACCCTCCTTCATTGCACGA < 2:272501/76‑1 TTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATG > 2:631475/1‑76 TTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATG > 2:1660747/1‑76 TTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATG < 2:936178/76‑1 TTTATGCATAAGCCCTATCTCTGGTAATCGTGTTNCATTGACNACNTCNATAGAATCATCCTTCATAGCACGATGC > 1:1481369/1‑76 TCATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2100210‑2100307‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccttacacgggcttattttttTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGC > REL606/2122454‑2122527 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |