| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2038724 = | 74 (1.190) | 7 (0.130) | 4/134 | 6.6 | 9.9% | coding (225/822 nt) | wbbB | putative glycosyltransferase WbbB |
| ? | REL606 | 2039214 = | 62 (1.120) | coding (481/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACAATGAAGGGATTTCATATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2038804‑2038724‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttttaATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTAT > REL606/2039214‑2039286 ACAATGAAGGGATTTCATATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATT > 2:1871745/1‑76 TGAAGGGATTTCATATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTT > 1:1895820/1‑76 TGAAGGGATTTCATATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTT > 1:269761/1‑76 TGAAGGGATTTCATATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTT > 2:1663781/1‑76 TGAAGGGATTTCATATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTT > 2:1663776/1‑76 ATATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTTAATGAATCAAGA < 2:478476/76‑1 ATATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTTAATGAATCAAGA < 2:478458/76‑1 ATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTTAATGAATCAAGATG < 2:1497745/76‑1 ATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTTAATGAATCAAGATG < 2:1497751/76‑1 ATCGAAAACGGGACAAATTCTCTGTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTTAATGAATCAAGATG < 2:1497729/76‑1 AAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTTAATGAATCAAGATGTTCAC < 2:1227264/76‑1 CGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTTAATGAATCAAGATGTTCACAAT < 2:35745/76‑1 TTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCT > 1:960040/1‑76 TTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTT > 2:1887097/1‑76 TTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTT < 1:1562716/76‑1 TTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTA > 1:415424/1‑76 TTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTAT > 2:1087313/1‑76 ACAATGAAGGGATTTCATATCGAAAACGGGACAAATTCTCTTTTTGAGTTTTCTGCCTATAAGGAAGGAATAGATTTTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2038804‑2038724‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑attttttaATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTAT > REL606/2039214‑2039286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |