| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021732 = | 109 (1.760) | 13 (0.230) | 7/138 | 5.3 | 12.5% | coding (953/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | 3022271 = | 82 (1.440) | coding (414/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCCATGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021812‑3021732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatatACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTT > REL606/3022271‑3022345 TCCATGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAG < 1:624893/76‑1TCCATGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAG < 2:866443/76‑1 CCATGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGA > 1:962785/1‑76 ATGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAAT < 2:720060/76‑1 TGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATA > 2:503214/1‑76 GTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATAT < 2:589763/76‑1 GTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTG < 2:1790228/76‑1 GTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTG < 2:1790247/76‑1 AGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGAT < 2:926876/76‑1 AGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAACGCTGCCGTTTTATAAGAATATACCTGAT < 2:926872/76‑1 TGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTT < 2:123550/76‑1 TGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTT < 2:123562/76‑1 AAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAA < 2:1917191/76‑1 AAAAGAAAACAAGGCGGAAAAAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAA < 2:683184/76‑1 AGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATAT < 2:258424/76‑1 GAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATC < 2:610491/76‑1 GAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATC < 2:610503/76‑1 AACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATCTAT < 2:1653582/76‑1 AACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATATACCTGATTTCAAATATCTAT < 2:1653554/76‑1 AATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTG > 1:1022658/1‑76 AATATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTG > 1:1228174/1‑76 TATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGT > 1:74089/1‑76 TATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGT > 1:1917788/1‑76 ATACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTT < 2:649516/76‑1 TACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTT > 2:81953/1‑76 TCCATGTAGCGTAGTGCTAAAAGAAAACAAGGCGGAAAGAATACATATCCCCAAAAGAATGCTGCCGTTTTATAAGAATAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3021812‑3021732‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaatatACCTGATTTCAAATATCTATCAACTCCAACATCACCTGATGTAATTACATAGTCGTAGATTCTAATAATTGGTTT > REL606/3022271‑3022345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |