| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3021732 = | 109 (1.760) | 13 (0.230) | 7/138 | 5.3 | 12.5% | coding (953/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | 3022271 = | 82 (1.440) | coding (414/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 110 total aligned reads displayed.
TAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTAC > REL606/3021657‑3021807 | tAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaataaaa > 2:517671/1‑76 (MQ=255)tAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaataaaa > 2:808388/1‑76 (MQ=255) aaGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaataaaat > 2:600565/1‑76 (MQ=255) aaGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaataaaat > 2:600570/1‑76 (MQ=255) aaGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaataaaat > 1:1646411/1‑76 (MQ=255) gATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAatat < 1:1564896/76‑1 (MQ=255) atatCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATAtt > 2:1753503/1‑76 (MQ=255) tatCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTc > 2:497199/1‑76 (MQ=255) tatCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTc > 2:122673/1‑76 (MQ=255) tatCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTc > 2:927214/1‑76 (MQ=255) cATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTta > 2:1515333/1‑76 (MQ=255) tGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTtata < 2:225298/76‑1 (MQ=255) tGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTtata > 2:1375983/1‑76 (MQ=255) tGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTtata < 1:169225/76‑1 (MQ=255) aaTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaaa < 1:1954840/76‑1 (MQ=255) aaTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaaa < 1:1922357/76‑1 (MQ=255) aaTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaaa < 1:1687176/76‑1 (MQ=255) aaTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaaa > 2:176798/1‑76 (MQ=255) aaTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaaa < 1:1557399/76‑1 (MQ=255) aaTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaaa > 2:499432/1‑76 (MQ=255) aTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAAc < 1:299043/76‑1 (MQ=255) aTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAAc < 1:299052/76‑1 (MQ=255) aTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAAc < 2:1048111/76‑1 (MQ=255) tCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACg > 1:243964/1‑76 (MQ=255) tCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACg < 1:660538/76‑1 (MQ=255) cAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACgg > 2:1202262/1‑76 (MQ=255) cAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACgg < 1:911717/76‑1 (MQ=255) aaTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgc > 2:764785/1‑76 (MQ=255) aaTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgc < 2:1899384/76‑1 (MQ=255) aaTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgc > 2:764810/1‑76 (MQ=255) aTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgca < 1:1483113/76‑1 (MQ=255) aTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgca < 1:1483077/76‑1 (MQ=255) aTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgca > 1:505709/1‑76 (MQ=255) aTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgca < 1:530325/76‑1 (MQ=255) aTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgca > 1:1120608/1‑76 (MQ=255) tataTCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgcagc > 1:222439/1‑76 (MQ=255) tataTCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgcagc > 1:733785/1‑76 (MQ=255) atatCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgcagca > 1:1345915/1‑76 (MQ=255) atCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCAtt > 1:821198/1‑76 (MQ=255) tCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTc > 2:580370/1‑76 (MQ=255) naTTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCt > 1:125106/2‑76 (MQ=255) cATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCt > 1:1190694/1‑76 (MQ=255) cATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCt > 1:1382088/1‑76 (MQ=255) cATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCt < 2:1859610/76‑1 (MQ=255) cATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCt > 2:1203198/1‑76 (MQ=255) cATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCt > 1:327009/1‑76 (MQ=255) aTTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCtt < 1:693144/76‑1 (MQ=255) ttAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCttt > 1:704408/1‑76 (MQ=255) ttAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCttt > 1:506363/1‑76 (MQ=255) tAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCtttt < 2:560584/76‑1 (MQ=255) aGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTg > 2:1624931/1‑76 (MQ=255) aGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTg > 2:756703/1‑76 (MQ=255) aGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTg > 2:1202644/1‑76 (MQ=255) gCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTgggg < 2:378805/76‑1 (MQ=255) cATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGa > 2:193685/1‑76 (MQ=255) atgatgGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGat < 1:815798/76‑1 (MQ=255) tgatgGAATACTTGAATTACACACCACCTTATCAAACAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGata < 1:1350925/76‑1 (MQ=255) tagaTACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTa > 2:791965/4‑76 (MQ=255) gAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTAt < 1:831591/76‑1 (MQ=255) aaTACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTAtt < 2:237575/76‑1 (MQ=255) aaTACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTAtt > 2:517727/1‑76 (MQ=255) tACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCt < 2:303926/76‑1 (MQ=255) aCTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCtt < 1:321193/76‑1 (MQ=255) aCTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCtt < 1:321183/76‑1 (MQ=255) cTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCttt < 2:1027447/76‑1 (MQ=255) tGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTcc > 2:78986/1‑76 (MQ=255) tGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTcc > 2:1724443/1‑76 (MQ=255) gAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCg < 1:1675406/76‑1 (MQ=255) ttACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCt > 1:1386565/1‑76 (MQ=255) tACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCtt < 2:1766626/76‑1 (MQ=255) tACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCtt < 1:33173/76‑1 (MQ=255) acacacCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTTGGGATATGTATTCTTTCCGCCTTg > 1:1040649/1‑76 (MQ=255) acacacCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTg < 1:1839415/76‑1 (MQ=255) acacacCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTg < 2:125106/76‑1 (MQ=255) acacacCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTg > 1:369291/1‑76 (MQ=255) acacacCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTg < 2:327009/76‑1 (MQ=255) acacacCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTg < 2:1190694/76‑1 (MQ=255) acacacCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCCCCTTg > 1:369307/1‑76 (MQ=255) caccacCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGttt > 1:794857/1‑76 (MQ=255) caccacCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGttt > 1:1385658/1‑76 (MQ=255) ccaccTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTc > 1:751351/1‑76 (MQ=255) ccaccTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTc > 2:1381217/1‑76 (MQ=255) ccaccTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTc > 1:213025/1‑76 (MQ=255) accTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCtt > 2:871188/1‑76 (MQ=255) cTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCtttt < 2:182643/76‑1 (MQ=255) ttATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTa < 1:108391/76‑1 (MQ=255) ttATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTa < 2:777738/76‑1 (MQ=255) tATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAg < 2:243710/76‑1 (MQ=255) tATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAg > 1:910915/1‑76 (MQ=255) cAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCAc > 2:1849361/1‑76 (MQ=255) aaataaaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACt < 1:582015/76‑1 (MQ=255) ataaaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTAc < 1:864011/76‑1 (MQ=255) aaaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGc > 1:1952177/1‑76 (MQ=255) aaaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGc < 1:1833343/76‑1 (MQ=255) aaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCt < 2:694478/76‑1 (MQ=255) aaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCt < 2:1651227/76‑1 (MQ=255) aaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCt < 1:1736856/76‑1 (MQ=255) aaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCt < 1:1736843/76‑1 (MQ=255) aataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTa > 2:461208/1‑76 (MQ=255) atatTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTAc > 2:589763/1‑76 (MQ=255) | TAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTAC > REL606/3021657‑3021807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |