| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3523362 = | 105 (1.690) | 6 (0.110) | 4/134 | 6.6 | 6.3% | intergenic (‑361/+36) | ugpB/livF | glycerol‑3‑phosphate transporter subunit/leucine/isoleucine/valine transporter subunit |
| ? | REL606 | 3523382 = | 86 (1.550) | intergenic (‑381/+16) | ugpB/livF | glycerol‑3‑phosphate transporter subunit/leucine/isoleucine/valine transporter subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 109 total aligned reads displayed.
CAATATATTGCAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCTTCGTTCGCC > REL606/3523287‑3523437 | cAATATATTCCAACTCCCCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCaa < 2:775367/76‑1 (MQ=255) tatatTGCAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCTACTGTCTCAAAgg > 1:1493799/1‑76 (MQ=255) tatatTGCAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAgg > 2:905371/1‑76 (MQ=255) tatatTGCAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAgg < 2:1958762/76‑1 (MQ=255) atatTGCAACTCCCCCAGTAGGCCTGATAAGCGCAGCGCATCGGGCAATTTTACATTTGTCACCTGTCTCAAAGGa < 1:1251748/76‑1 (MQ=255) atatTGCAACTCACCCAGTAGGCCTGGTAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGa < 1:1660577/76‑1 (MQ=255) tatTGCAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAg < 2:238682/76‑1 (MQ=255) gCAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtt > 2:1563508/1‑76 (MQ=255) gCAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtt < 2:1728546/76‑1 (MQ=255) gCAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtt > 1:604421/1‑76 (MQ=255) cAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCttt > 1:656287/1‑76 (MQ=255) cAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCttt > 2:603655/1‑76 (MQ=255) aaCTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt > 2:1191670/1‑76 (MQ=255) aaCTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt < 2:113020/76‑1 (MQ=255) aaCTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt > 2:268351/1‑76 (MQ=255) aaCTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt < 2:359966/76‑1 (MQ=255) aaCTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCtttt < 2:1690580/76‑1 (MQ=255) aCTCCCCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTg < 1:1465395/76‑1 (MQ=255) aCTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTg < 1:185139/76‑1 (MQ=255) aCTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTg < 2:12281/76‑1 (MQ=255) cTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGa < 1:1804858/76‑1 (MQ=255) naCCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACt > 1:891756/2‑76 (MQ=255) cACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACt > 2:388939/1‑76 (MQ=255) ccAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCt > 1:961519/1‑76 (MQ=255) ccAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCt < 2:35771/76‑1 (MQ=255) cggTAGGCCTGAGAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCtt < 2:509232/74‑1 (MQ=255) cAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCtt < 2:644750/76‑1 (MQ=255) cAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCtt < 2:330433/76‑1 (MQ=255) cAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCtt < 2:427974/76‑1 (MQ=255) aGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTa > 2:376570/1‑76 (MQ=255) aGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTa < 2:1981408/76‑1 (MQ=255) aGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTa < 2:237345/76‑1 (MQ=255) aGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTa < 2:1061805/76‑1 (MQ=255) gTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTat < 2:1921274/76‑1 (MQ=255) gTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTat > 2:394784/1‑76 (MQ=255) gTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTat < 2:814134/76‑1 (MQ=255) tAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatc > 2:206037/1‑76 (MQ=255) tAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatc > 1:1469592/1‑76 (MQ=255) tAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatc > 2:172658/1‑76 (MQ=255) tAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatc < 2:666524/76‑1 (MQ=255) aGGCCTGATAAGCGCGGCGCATCAGGCATTTGTACATTTGTCACCTGGCTCAAAGGAGGCTTTTGACTCCTTatca > 2:1632931/1‑76 (MQ=25) aGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatca > 2:117244/1‑76 (MQ=255) aGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatca < 1:585139/76‑1 (MQ=255) aGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatca > 1:334276/1‑76 (MQ=255) aGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatca < 2:94306/76‑1 (MQ=255) ccTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatcaatc < 1:1013460/76‑1 (MQ=255) cTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTatcaatca < 1:991632/76‑1 (MQ=255) gATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAATCTTTTGACTCCTTATCAATCAAc > 1:196683/1‑76 (MQ=255) aaaaGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACg < 2:848213/74‑1 (MQ=255) aTAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACg > 2:1928850/1‑76 (MQ=255) aTAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACg < 1:1434928/76‑1 (MQ=255) aaGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACgtg > 2:1064759/1‑76 (MQ=255) gcgcagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGtt < 2:1655704/76‑1 (MQ=255) gcgcagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGtt < 2:148482/76‑1 (MQ=255) gcgcagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGtt < 2:1467768/76‑1 (MQ=255) cagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGttatt > 1:1476625/1‑76 (MQ=255) cagcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGttatt < 2:1956608/76‑1 (MQ=255) agcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGttattn < 1:1817522/76‑2 (MQ=255) agcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGttatta < 2:771391/76‑1 (MQ=255) agcgcaTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGttatta < 2:1129042/76‑1 (MQ=255) gcgcaTCGGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTAc < 1:1364347/76‑1 (MQ=255) caTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCg > 2:150986/1‑76 (MQ=255) caTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCg < 1:909355/76‑1 (MQ=255) aTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGc > 1:945140/1‑76 (MQ=255) aTCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGc > 2:726578/1‑76 (MQ=255) cAGCCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCt < 1:1252329/76‑1 (MQ=255) agccAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTa < 2:1315934/73‑1 (MQ=255) aGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTa < 2:1147311/76‑1 (MQ=255) aGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTa < 1:898588/76‑1 (MQ=255) ggCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTaa < 1:1876672/76‑1 (MQ=255) ggCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTaa < 1:1555163/76‑1 (MQ=255) ggCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTaa < 2:1473076/76‑1 (MQ=255) ttttACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACg > 1:1013414/1‑76 (MQ=255) ttttACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACg > 1:1983772/1‑76 (MQ=255) ttttACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACg < 2:1346115/76‑1 (MQ=255) ttACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCGTTATCAATCAACGTGTTATTACCCGCCTAAATACGCa < 2:1916734/76‑1 (MQ=255) aCATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACt > 2:1944284/1‑76 (MQ=255) aCATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACt > 1:1948408/1‑76 (MQ=255) aCATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACt > 2:182599/1‑76 (MQ=255) aCATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACt > 1:955108/1‑76 (MQ=255) aTTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTtc < 2:583461/76‑1 (MQ=255) ttGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTtctc < 2:1328749/76‑1 (MQ=255) ttGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTtctc < 1:1977535/76‑1 (MQ=255) tGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCa > 2:1571626/1‑76 (MQ=255) aCCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGc > 2:1209007/1‑76 (MQ=255) cTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCtt > 2:174711/1‑76 (MQ=255) cTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCtt < 2:513664/76‑1 (MQ=255) gTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCttcg > 2:866809/1‑76 (MQ=255) ctcAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCttcgtt > 2:864876/1‑76 (MQ=255) tcAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCttcgttc > 2:60205/1‑76 (MQ=255) tcAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCttcgttc > 2:33888/1‑76 (MQ=255) cAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCttcgttcg > 1:79609/1‑76 (MQ=255) cAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCttcgttcg > 2:1308594/1‑76 (MQ=255) cAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCttcgttcg > 2:171964/1‑76 (MQ=255) cAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCttcgttcc > 2:1838344/1‑75 (MQ=255) aaaGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCTTCGTTCGc > 1:253561/1‑76 (MQ=255) aaGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCTTCGTTCGcc > 1:754586/1‑76 (MQ=255) aaGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCTTCGTTCGcc > 2:225285/1‑76 (MQ=255) aaGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCTTCGTTCGcc > 2:1426749/1‑76 (MQ=255) aaGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCTTCGTTCGcc > 2:994279/1‑76 (MQ=255) | CAATATATTGCAACTCACCCAGTAGGCCTGATAAGCGCAGCGCATCAGGCAATTTTACATTTGTCACCTGTCTCAAAGGAGTCTTTTGACTCCTTATCAATCAACGTGTTATTACCCGCCTAAATACGCACTTCTCACTGCTTCGTTCGCC > REL606/3523287‑3523437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |