| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 570046 = | 71 (1.210) | 6 (0.110) | 6/142 | 6.1 | 7.0% | intergenic (‑110/+569) | yhhI/ECB_00526 | predicted transposase/hypothetical protein |
| ? | REL606 | 570481 = | 92 (1.660) | intergenic (‑545/+134) | yhhI/ECB_00526 | predicted transposase/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATAGCTACACCATGTCACGTAACATGATGCCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/570123‑570046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tactCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAT > REL606/570481‑570555 AATAGCTACACCATGTCACGTAACATGATGCCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTA < 1:1162471/76‑1AATAGCTACACCATGTCACGTAACATGATGCCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTA < 1:1317677/76‑1 ATAGCTACACCATGTCACGTAACATGATGCCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTAC > 1:152811/1‑76 ATAGCTACACCATGTCACGTAACATGATGCCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTAC > 1:152821/1‑76 TAGCTACACCATGTCACGTAACATGATGCCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTACT > 1:1604304/1‑76 ACCATGTCACGTAACATGATGCCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTACTCATTTAC < 2:1433074/76‑1 TCACGTAACATGATGCCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTACTCATTTACATCAAA < 2:1820387/76‑1 CACGTAACATGATGCCTGGATATTAACCAGGAAAAGATGATCAGAAGTTCACTTTTTGTACTCATTTACATCAAAG < 2:876461/76‑1 CCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTACTCATTTACATCAAAGTAGTCATATTTTAA < 2:46774/76‑1 ATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTACTCATTTACATCAGAGTAGTCATATTTTAATATCGAA < 2:1756813/76‑1 CTTTTTTTACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTA < 2:484733/76‑1 TACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATAC > 1:1064198/1‑76 CTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTA < 1:1383630/76‑1 TCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAT < 2:1549005/76‑1 TCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAT < 2:1549016/76‑1 TCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAT < 2:1549024/76‑1 TCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAT > 2:433126/1‑76 AATAGCTACACCATGTCACGTAACATGATGCCTGGATATTAACCAGGAAAAGATCATCAGAAGTTCACTTTTTGTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/570123‑570046‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tactCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAT > REL606/570481‑570555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |