| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 570046 = | 71 (1.210) | 6 (0.110) | 6/142 | 6.1 | 7.0% | intergenic (‑110/+569) | yhhI/ECB_00526 | predicted transposase/hypothetical protein |
| ? | REL606 | 570481 = | 92 (1.660) | intergenic (‑545/+134) | yhhI/ECB_00526 | predicted transposase/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATCTTCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTATC > REL606/570406‑570556 | atcTTCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTc > 2:432390/1‑76 (MQ=255)atcTTCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTc > 2:432380/1‑76 (MQ=255) tcTTCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCa < 1:785481/76‑1 (MQ=255) tcTTCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCa > 1:1563851/1‑76 (MQ=255) cTTCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCAt < 2:1296479/76‑1 (MQ=255) ttCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCAtt < 2:457517/76‑1 (MQ=255) tCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCAttt < 1:457317/76‑1 (MQ=255) tCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCAttt > 1:736856/1‑76 (MQ=255) tCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCAttt > 1:736859/1‑76 (MQ=255) cGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTa < 1:1316177/76‑1 (MQ=255) cGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTa < 2:218473/76‑1 (MQ=255) gCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTAc < 1:1433074/76‑1 (MQ=255) gCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTCTCATAAGTAATG‑TTTTTTTATACTCATTTAc < 1:1123601/76‑1 (MQ=255) gCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTCTCATAAGTAATG‑TTTTTTTATACTCATTTAc < 1:1123620/76‑1 (MQ=255) ccTAATAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTAc > 2:867776/2‑76 (MQ=255) cTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACa > 1:491061/1‑76 (MQ=255) tAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACAt < 1:236972/76‑1 (MQ=255) gTAATTCAATATACTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACagac < 2:1770484/76‑4 (MQ=255) tAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCaa > 2:1618344/1‑76 (MQ=255) tAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCaa > 2:1618350/1‑76 (MQ=255) aaTTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCaaa < 1:1820387/76‑1 (MQ=255) aTTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAag < 1:876461/76‑1 (MQ=255) tCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAagta < 1:1634195/76‑1 (MQ=255) tCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAagta < 1:1634206/76‑1 (MQ=255) tCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAagta < 1:1080399/76‑1 (MQ=255) tCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAagta < 1:698899/76‑1 (MQ=255) cAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAagtag > 1:1666618/1‑76 (MQ=255) aaTATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAagtagt > 2:289389/1‑76 (MQ=255) aaTATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAagtagt > 2:306943/1‑76 (MQ=255) atatatTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTc < 2:1453476/76‑1 (MQ=255) atatatTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTc > 2:916629/1‑76 (MQ=255) atatTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCat > 2:575811/1‑76 (MQ=255) atatTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCat < 1:1143660/76‑1 (MQ=255) atatTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCat > 1:1747157/1‑76 (MQ=255) atatACTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCat > 1:1869277/1‑76 (MQ=255) tatTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCata > 2:555531/1‑76 (MQ=255) atTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCatat < 1:1426152/76‑1 (MQ=255) ttCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATAtt < 2:163222/76‑1 (MQ=255) ttCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATAtt > 1:1730450/1‑76 (MQ=255) cTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATAtttt < 2:674391/76‑1 (MQ=255) cTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATAtttt < 2:674402/76‑1 (MQ=255) gCATCTTTGGCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTaa < 1:46774/76‑1 (MQ=255) aTCTTTGTCAATAAAAGATGCGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAata > 1:895934/1‑76 (MQ=255) cTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATc > 1:438813/1‑76 (MQ=255) cTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATc < 1:933592/76‑1 (MQ=255) tttGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCg < 2:42616/76‑1 (MQ=255) gTCAATAAAAGATGTGTCATAAGTAATGCTTTTGTTATACCCATTGTCATCAAAGTAGTCATATTTTAATATCGaa < 1:1756813/76‑1 (MQ=255) tCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGaaaa < 1:1580677/76‑1 (MQ=255) tCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGaaaa > 1:532194/1‑76 (MQ=255) aTAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTc < 2:1575008/76‑1 (MQ=255) aTAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTc > 2:740279/1‑76 (MQ=255) aaaGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAAt > 2:151681/1‑76 (MQ=255) aaGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATg > 2:573188/1‑76 (MQ=255) aGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGt > 2:1822644/1‑76 (MQ=255) gATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTc < 1:1658103/76‑1 (MQ=255) aTGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCt > 1:708585/1‑76 (MQ=255) aTGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCt < 2:1510826/76‑1 (MQ=255) tgtgTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTa > 1:1449767/1‑76 (MQ=255) gtgtCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTag < 1:1309295/76‑1 (MQ=255) gtgtCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTag < 1:1344467/76‑1 (MQ=255) gtgtCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTag < 2:862434/76‑1 (MQ=255) gtgtCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTag < 1:1294374/76‑1 (MQ=255) tgtCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTaga > 2:1416526/1‑76 (MQ=255) gtCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTagag > 2:1744146/1‑76 (MQ=255) gtCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTagag > 2:1744144/1‑76 (MQ=255) tCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGc > 2:160179/1‑76 (MQ=255) aTAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCAt > 2:716826/1‑76 (MQ=255) aTAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCAt > 2:716842/1‑76 (MQ=255) aTAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCAt < 1:767023/76‑1 (MQ=255) tAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCAtt > 1:1299129/1‑76 (MQ=255) gTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTAc < 1:830333/76‑1 (MQ=255) tAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACa > 2:67629/1‑76 (MQ=255) tAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACa > 2:67646/1‑76 (MQ=255) tG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAAc > 2:801130/1‑76 (MQ=255) tG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAAc > 2:142797/1‑76 (MQ=255) atttttttttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACaaa < 1:519520/73‑1 (MQ=255) tttttttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACtt < 2:727922/76‑1 (MQ=255) tttttttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACtt > 1:302733/1‑76 (MQ=255) ttttttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTta < 2:846526/76‑1 (MQ=255) ttttttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTta < 1:484733/76‑1 (MQ=255) cttttttTACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTta < 2:484733/75‑1 (MQ=255) tttttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTtat > 2:1308484/1‑76 (MQ=255) ttttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTtata > 2:47278/1‑76 (MQ=255) ttttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTtata > 1:1051448/1‑76 (MQ=255) ttttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTtata > 1:492132/1‑76 (MQ=255) tttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATaa > 1:1106605/1‑76 (MQ=255) ttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATaaa > 2:285566/1‑76 (MQ=255) ttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATaaa < 1:548613/76‑1 (MQ=255) ttATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATaaa < 1:548607/76‑1 (MQ=255) tataCTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAAt > 2:360974/1‑76 (MQ=255) tataCTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAAt > 2:601760/1‑76 (MQ=255) ataCTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATa < 2:685395/76‑1 (MQ=255) ataCTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATa < 2:685409/76‑1 (MQ=255) taCTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATAc > 1:1064198/1‑76 (MQ=255) cTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTa < 1:1383630/76‑1 (MQ=255) tCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAt < 2:1549024/76‑1 (MQ=255) tCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAt < 2:1549016/76‑1 (MQ=255) tCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAt < 2:1549005/76‑1 (MQ=255) tCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTAt > 2:433126/1‑76 (MQ=255) cATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTATc > 1:531093/1‑76 (MQ=255) | ATCTTCGCTAGTAATTCAATATATTCTGCATCTTTGTCAATAAAAGATGTGTCATAAGTAATG‑TTTTTTTATACTCATTTACATCAAAGTAGTCATATTTTAATATCGAAAAGTCAATGTCTAGAGCATTTACAAACTTATAAATACTATC > REL606/570406‑570556 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |