| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 2,490,667 | Δ16 bp | coding (485‑500/837 nt) | eutJ ← | predicted chaperonin, ethanolamine utilization protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 2490667 | 2490682 | 16 | 39 [0] | [0] 39 | eutJ | predicted chaperonin, ethanolamine utilization protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2490666 | 0 (0.000) | 37 (0.700) | 27/136 | 1.1 | 100% | coding (501/837 nt) | eutJ | predicted chaperonin, ethanolamine utilization protein |
| ? | REL606 | 2490683 = | 0 (0.000) | coding (484/837 nt) | eutJ | predicted chaperonin, ethanolamine utilization protein | |||||
GTGACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2490585‑2490666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccgccgAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTACACCGGCGTTGT > REL606/2490683‑2490757 GTGACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGT > 2:272701/1‑76 GACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCC > 1:317715/1‑76 CCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGC < 2:87995/76‑1 CGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCC < 2:845462/76‑1 CGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGA > 2:392641/1‑76 GCTTGTCCTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAG < 1:765716/76‑1 GCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAG < 1:1366518/76‑1 GCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAG > 2:281591/1‑76 GCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAG < 2:623103/76‑1 CTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGT < 1:351812/76‑1 TTGTCCTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTA < 2:166991/76‑1 TGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTAC < 1:1232280/76‑1 TGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTAC < 2:1670886/76‑1 TACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGT < 2:1586349/76‑1 TACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGT > 2:1695593/1‑76 cCTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTC < 2:1368084/75‑1 ACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTC < 2:1119647/76‑1 CTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCT < 2:1643652/76‑1 TCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTT > 1:70144/1‑76 TCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTT > 2:1098834/1‑76 TCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTT > 1:619775/1‑76 TCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTT < 2:159258/76‑1 gCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCGCCTTGCCCTT < 1:1773241/75‑1 TCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTT < 1:9712/76‑1 TCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTT < 1:1756966/76‑1 caAGCAAAATACTGCGATTTCCTGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTC < 2:794033/74‑1 CAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCA > 1:520627/1‑76 AGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCAC < 2:1355343/76‑1 GAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCACGAT > 1:1260688/1‑76 CGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAAT < 1:61009/76‑1 CGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAAT < 1:175102/76‑1 cgTTTCCGGCGAGAGTAAGAGAGATGTGATGTCCGCCGAGTACGTCACCGTGCCCTTTTGCACGATGGCAATGCCG < 2:1786754/74‑1 TTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTA > 2:1307560/1‑76 TCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTCCGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAG > 2:1628661/1‑76 TCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAG < 2:1519223/76‑1 TCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAG < 2:776274/76‑1 CGAGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCG < 2:402357/76‑1 AGAGTCAGAGAGATGTGATGTCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCC > 2:1640771/1‑76 AGAGATGTGATGTCCGCCGAGTACGTCCCCTTGCCCTTTTTCACGATGGCAATGCGGGTAGTGCCGCCGCCGATAT < 2:252216/76‑1 GATGTGATGTCCGCCGATTACGTCCCCTTCCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCA < 2:709921/76‑1 GATGCCCGCCGAGTACGTCCCCTTGCCCTTTTTCCCGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTACA < 1:355913/76‑1 gcCCGCCGAGTACGTCCCCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTACACCG < 2:1427181/74‑1 GAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTACACCGGCGTTGT > 2:390892/1‑76 GTGACCGCGCTTGTACTGCTCCGCCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2490585‑2490666‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tccgccgAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTACACCGGCGTTGT > REL606/2490683‑2490757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |