Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
MC JC | REL606 | 2,490,667 | Δ16 bp | coding (485‑500/837 nt) | eutJ ← | predicted chaperonin, ethanolamine utilization protein |
Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 2490667 | 2490682 | 16 | 39 [0] | [0] 39 | eutJ | predicted chaperonin, ethanolamine utilization protein |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 2490666 | 0 (0.000) | 37 (0.700) | 27/136 | 1.1 | 100% | coding (501/837 nt) | eutJ | predicted chaperonin, ethanolamine utilization protein |
? | REL606 | 2490683 = | 0 (0.000) | coding (484/837 nt) | eutJ | predicted chaperonin, ethanolamine utilization protein |
CCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTACACCGGCGTTGT > REL606/2490608‑2490757 | cgcttgtactgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccga > 2:392641‑M2/76‑76 (MQ=255) gcttgtcctgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAg < 1:765716‑M2/2‑1 (MQ=255) gcttgtactgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAg < 1:1366518‑M2/2‑1 (MQ=255) gcttgtactgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAg > 2:281591‑M2/75‑76 (MQ=255) gcttgtactgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAg < 2:623103‑M2/2‑1 (MQ=255) cttgtactgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGt < 1:351812‑M2/3‑1 (MQ=255) ttgtcctgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTa < 2:166991‑M2/4‑1 (MQ=255) tgtactgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTAc < 1:1232280‑M2/5‑1 (MQ=255) tgtactgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTAc < 2:1670886‑M2/5‑1 (MQ=255) tactgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGt > 2:1695593‑M2/70‑76 (MQ=255) tactgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGt < 2:1586349‑M2/7‑1 (MQ=255) cctgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTc < 2:1368084‑M2/8‑1 (MQ=255) actgctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTc < 2:1119647‑M2/8‑1 (MQ=255) ctccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCt < 2:1643652‑M2/12‑1 (MQ=255) tccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCtt > 1:619775‑M2/64‑76 (MQ=255) tccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCtt > 1:70144‑M2/64‑76 (MQ=255) tccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCtt > 2:1098834‑M2/64‑76 (MQ=255) tccgcctcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCtt < 2:159258‑M2/13‑1 (MQ=255) tcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCtt < 1:9712‑M2/19‑1 (MQ=255) tcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCtt < 1:1756966‑M2/19‑1 (MQ=255) gcttccagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCGCCTTGCCCtt < 1:1773241‑M2/19‑1 (MQ=255) caagcaaaatactgcgatttcctgcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTc < 2:794033‑M2/23‑1 (MQ=255) cagcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCa > 1:520627‑M2/53‑76 (MQ=255) agcgaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCAc < 2:1355343‑M2/25‑1 (MQ=255) gaaatacggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCACGAt > 1:1260688‑M2/49‑76 (MQ=255) cggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCACGATGGCAAt < 1:61009‑M2/34‑1 (MQ=255) cggcgatttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCACGATGGCAAt < 1:175102‑M2/34‑1 (MQ=255) cgtttccggcgagagtaagagagatgtgatgtccgccgAGTACGTCACCGTGCCCTTTTGCACGATGGCAATGCCg < 2:1786754‑M2/38‑1 (MQ=255) ttccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTa > 2:1307560‑M2/36‑76 (MQ=255) tccggcgagagtcagagagatgtgatgtccgccgAGTCCGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAg > 2:1628661‑M2/35‑76 (MQ=255) tccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAg < 2:1519223‑M2/42‑1 (MQ=255) tccggcgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAg < 2:776274‑M2/42‑1 (MQ=255) cgagagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTgccg < 2:402357‑M2/47‑1 (MQ=255) agagtcagagagatgtgatgtccgccgAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTgccgcc > 2:1640771‑M2/28‑76 (MQ=255) agagatgtgatgtccgccgAGTACGTCCCCTTGCCCTTTTTCACGATGGCAATGCGGGTAGTGCCGCCGCCGatat < 2:252216‑M2/57‑1 (MQ=255) gatgtgatgtccgccgATTACGTCCCCTTCCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCa < 2:709921‑M2/60‑1 (MQ=255) gatgcccgccgAGTACGTCCCCTTGCCCTTTTTCCCGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTaca < 1:355913‑M2/65‑1 (MQ=255) gcccgccgAGTACGTCCCCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTACACCg < 2:1427181‑M2/68‑1 (MQ=255) gAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTACACCGGCGTTGt > 2:390892‑M2/2‑76 (MQ=255) | CCTCTTCCAGCGAAATACGGCGATTTCCGGCGAGAGTCAGAGAGATGTGATGTCCGCCGGTGGCTTCATCCGCCGAGTACGTCACCTTGCCCTTTTTCACGATGGCAATGCCGGTAGTGCCGCCGCCGATATCCACTACACCGGCGTTGT > REL606/2490608‑2490757 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |