New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2038943 = | 57 (0.970) | 30 (0.540) | 12/142 | 4.0 | 30.3% | coding (6/822 nt) | wbbB | putative glycosyltransferase WbbB |
? | REL606 | 2039511 = | 84 (1.520) | coding (184/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
Rejected: Coverage evenness skew score above cutoff. |
ATTATATAATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAAGAGCGGGGATA > REL606/2038868‑2039017 | atTATATAATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACaa < 1:962725/76‑1 (MQ=255) atTATATAATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACaa < 1:671816/76‑1 (MQ=255) atTATATAATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACaa < 1:671800/76‑1 (MQ=255) atTATATAATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACaa < 1:19812/76‑1 (MQ=255) tatataATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATc > 2:1722820/1‑76 (MQ=255) tatataATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATc > 1:726793/1‑76 (MQ=255) atataATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATcc < 2:854865/76‑1 (MQ=255) atataATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATcc < 1:499106/76‑1 (MQ=255) tataATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCa < 2:549007/76‑1 (MQ=255) tataATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCa < 1:1335879/76‑1 (MQ=255) tataATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCa < 1:1339777/76‑1 (MQ=255) tataATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCa < 1:1339793/76‑1 (MQ=255) tataATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCa > 2:272887/1‑76 (MQ=255) taATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCAtt > 2:539289/1‑76 (MQ=255) aTTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATtat > 2:870556/1‑76 (MQ=255) tattaATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATaaa > 1:699110/1‑76 (MQ=255) attaattaTGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAat < 1:524785/76‑1 (MQ=255) aattaTGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAatcat < 1:271113/76‑1 (MQ=255) aattaTGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAatcat < 1:767379/76‑1 (MQ=255) aTGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAGTCATCCCa < 1:1280207/76‑1 (MQ=255) gAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATTCATTATAAATCATCCCAat > 2:1186142/1‑76 (MQ=255) gAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAat > 1:1810089/1‑76 (MQ=255) ttCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAattct < 2:47828/76‑3 (MQ=255) tGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAattgattg < 1:295187/76‑1 (MQ=255) ggCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAAttgattga < 1:126185/76‑1 (MQ=255) ggCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAAttgattga > 1:1833215/1‑76 (MQ=255) cTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAg > 2:329229/1‑76 (MQ=255) cTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAg < 1:1566671/76‑1 (MQ=255) cTTTAAAGTATAAAAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAg < 1:1566677/76‑1 (MQ=255) aaGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGAt < 1:644399/76‑1 (MQ=255) ataAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACa < 2:205220/76‑1 (MQ=255) taAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACaa < 1:1780967/76‑1 (MQ=255) aaGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACaaa > 2:1628774/1‑76 (MQ=255) aaGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACaaa > 2:1666140/1‑76 (MQ=255) aCAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAaagaag < 1:989189/76‑1 (MQ=255) cAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGc > 1:562214/1‑76 (MQ=255) cAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGc > 1:309652/1‑76 (MQ=255) aGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGcc > 1:1065347/1‑76 (MQ=255) ccACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATa < 2:1554434/76‑1 (MQ=255) caATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACaa > 2:1476659/1‑76 (MQ=255) aTGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATg < 1:1851380/76‑1 (MQ=255) tGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACACTGa > 1:983880/1‑76 (MQ=255) tGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGa > 1:983863/1‑76 (MQ=255) gCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAg > 2:423902/1‑76 (MQ=255) aaTTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGa > 1:1356778/1‑76 (MQ=255) aTTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGaa < 1:688888/76‑1 (MQ=255) aTTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGaa < 1:344825/76‑1 (MQ=255) ttttttttACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCGATACAATGAGTTGAAag > 1:273812/1‑76 (MQ=255) ttttttttACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAag < 2:1803129/76‑1 (MQ=255) ttttttACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAagag < 1:576879/76‑1 (MQ=255) tttttACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAAGAGc < 1:409065/76‑1 (MQ=255) ttttACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAAGAGCg > 2:112001/1‑76 (MQ=255) ttttACAATCCATTAAAAATCATCCAAATTGATTGAAGGTGATAAAAAAAAAGCCATACAATGAGTTGAAAGAGCg < 1:843712/76‑1 (MQ=255) tttACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAAGAGCgg > 1:577425/1‑76 (MQ=255) tttACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAAGAGCgg > 1:577423/1‑76 (MQ=255) ttACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAAGAGCggg > 1:882473/1‑76 (MQ=255) aaTCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAAGAGCGGGGATa > 1:1685896/1‑76 (MQ=255) | ATTATATAATTTATTAATTATGAATTCTGGCTTTAAAGTATAAGAACAGGCCACAATGCATAATTTTTTTTTACAATCCATTATAAATCATCCCAATTGATTGAAGGTGATAACAAAGAAGCCATACAATGAGTTGAAAGAGCGGGGATA > REL606/2038868‑2039017 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |