| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,014,068 | (AAC)3→2 | coding (649‑651/1137 nt) | ECB_02815 → | Capsule polysaccharide export inner‑membrane protein kpsE |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3014063 = | 2 (0.030) | 60 (1.150) | 49/134 | 0.1 | 96.9% | coding (644/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE |
| ? | REL606 | = 3014059 | 2 (0.040) | coding (640/1137 nt) | ECB_02815 | Capsule polysaccharide export inner‑membrane protein kpsE | |||||
TTGCAGAAACGGAGATGGAAAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGAT > REL606/3013988‑3014138 | cctttgcagaaacggagatggaaaaggcacgccagcgtctggacgcccgcaaagcggaatggctctcttatcaaga < 1:1834721‑M1/1‑1 (MQ=255)cctttgcagaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaaga > 1:227469‑M1/76‑76 (MQ=255)cctttgcagaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaaga > 2:347926‑M1/76‑76 (MQ=255) ctttgcagaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagac < 1:1143672‑M1/2‑1 (MQ=255) ctttgcagaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagac < 2:238825‑M1/2‑1 (MQ=255) ttgcagaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaa > 1:583136‑M1/73‑76 (MQ=255) tgcagaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaac > 2:299753‑M1/72‑76 (MQ=255) tgcagaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaac > 2:1788892‑M1/72‑76 (MQ=255) gcagaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagacaaca > 1:1577520‑M1/71‑76 (MQ=255) gaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACg > 1:1013302‑M1/68‑76 (MQ=255) gaaacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACg < 2:385791‑M1/9‑1 (MQ=255) aaagggagatgaaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGt > 1:1720354‑M1/67‑76 (MQ=255) aacggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGtt > 1:240755‑M1/66‑76 (MQ=255) ggagatggaaaaggcacgccagcgtctggacgccagcaaagcggcattgctctcttatcaagACAACAACGTTCTg < 2:301662‑M1/14‑1 (MQ=255) ggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTg > 2:361345‑M1/63‑76 (MQ=255) ggagatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTg > 2:747761‑M1/63‑76 (MQ=255) gagagggaaagggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTgg > 2:1080860‑M1/62‑76 (MQ=255) agatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGa < 1:171806‑M1/16‑1 (MQ=255) agaggaaaagggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGa > 1:719761‑M1/61‑76 (MQ=255) gatggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGAt > 2:1109988‑M1/60‑76 (MQ=255) atggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATc < 1:1476152‑M1/18‑1 (MQ=255) atggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATc > 1:615922‑M1/59‑76 (MQ=255) atggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATc < 2:453362‑M1/18‑1 (MQ=255) ggaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCca > 2:1471618‑M1/57‑76 (MQ=255) gaaaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcac > 2:402824‑M1/56‑76 (MQ=255) aaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacag > 1:1494388‑M1/54‑76 (MQ=255) aaaggcacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacag > 2:364252‑M1/54‑76 (MQ=255) cacgccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacaggcaca > 1:1394375‑M1/49‑76 (MQ=255) ccagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacaggcacaggca < 2:335939‑M1/32‑1 (MQ=255) cagcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacaggcacaggcac < 1:623198‑M1/33‑1 (MQ=255) agcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacaggcacaggcaca < 2:1744489‑M1/34‑1 (MQ=255) agcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacaggcacaggcaca < 2:530288‑M1/34‑1 (MQ=255) gcgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacaggcacaggcacag > 1:214888‑M1/42‑76 (MQ=255) cgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacaggcacaggcacagg < 1:268341‑M1/36‑1 (MQ=255) cgtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCcacaggcacaggcacagg > 2:1167981‑M1/41‑76 (MQ=255) gtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCacaggcacaggcacaggc > 1:137012‑M1/40‑76 (MQ=255) gtctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCacaggcacaggcacaggc > 1:1563008‑M1/40‑76 (MQ=255) tctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAggcg > 1:628081‑M1/39‑76 (MQ=255) ctggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAggcgg > 2:248397‑M1/38‑76 (MQ=255) tggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAtgcggc < 2:708279‑M1/40‑1 (MQ=255) ggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGgcggcg > 2:1359703‑M1/36‑76 (MQ=255) ggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGgcggcg > 2:503107‑M1/36‑76 (MQ=255) ggacgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGgcggcg > 2:1367043‑M1/36‑76 (MQ=255) acgccagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAg > 1:1813766‑M1/34‑76 (MQ=255) cagcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACg < 2:1215765‑M1/47‑1 (MQ=255) gcaaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGtt > 2:1356390‑M1/28‑76 (MQ=255) caaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTa > 1:49484‑M1/27‑76 (MQ=255) aGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTa > 2:1128846/1‑76 (MQ=255) aaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAg < 2:877473‑M1/51‑1 (MQ=255) aaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAg < 1:303002‑M1/51‑1 (MQ=255) aaagcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAg > 1:687650‑M1/26‑76 (MQ=255) agcggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTg > 1:834839‑M1/24‑76 (MQ=255) ggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAAt > 1:530288‑M1/21‑76 (MQ=255) ggaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAAt > 1:1744489‑M1/21‑76 (MQ=255) gaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATa > 2:1340229‑M1/20‑76 (MQ=255) gaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATa > 2:1734681‑M1/20‑76 (MQ=255) gaattgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATa > 1:812254‑M1/20‑76 (MQ=255) attgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACg > 2:776892‑M1/18‑76 (MQ=255) ctctctTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGc < 1:1057141/76‑1 (MQ=255) tgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCt > 1:687452‑M1/16‑76 (MQ=255) tgctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCt < 1:1860340‑M1/61‑1 (MQ=255) gctctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTg < 1:38679‑M1/62‑1 (MQ=255) ctcttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATg < 2:1186723‑M1/65‑1 (MQ=255) cttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATggg < 2:1152661‑M1/67‑1 (MQ=255) cttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATggg > 1:1100381‑M1/10‑76 (MQ=255) ttatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGc < 2:852034‑M1/68‑1 (MQ=255) tatcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGcc > 1:1353385‑M1/8‑76 (MQ=255) atcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCa < 1:533741‑M1/70‑1 (MQ=255) tcaagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCag > 2:1776758‑M1/6‑76 (MQ=255) caagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCaga < 2:1033561‑M1/72‑1 (MQ=255) aagACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCagaa < 2:1717607‑M1/73‑1 (MQ=255) ACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGAt > 1:629971‑M1/1‑76 (MQ=255) | TTGCAGAAACGGAGATGGAAAAGGCACGCCAGCGTCTGGACGCCAGCAAAGCGGAATTGCTCTCTTATCAAGACAACAACAACGTTCTGGATCCACAGGCACAGGCACAGGCGGCGAGCACGTTAGTGAATACGCTGATGGGCCAGAAGAT > REL606/3013988‑3014138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |