| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,912,149 | Δ15 bp | coding (28‑42/99 nt) | ilvL → | ilvG operon leader peptide |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3912148 | 4 (0.060) | 48 (0.820) | 37/130 | 0.6 | 92.8% | coding (27/99 nt) | ilvL | ilvG operon leader peptide |
| ? | REL606 | 3912164 = | 4 (0.070) | coding (43/99 nt) | ilvL | ilvG operon leader peptide | |||||
CCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3912070‑3912148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACG > REL606/3912164‑3912236 CCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGAT < 1:741216/75‑1CCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGAT < 2:833799/75‑1 TATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTA < 1:1770158/75‑1 GGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTA > 2:1286224/1‑72 GGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTA < 1:1286224/72‑1 AACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGG > 1:876686/1‑75 AACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGG > 1:704135/1‑75 ACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGT < 1:1545334/75‑1 CTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGT < 2:755450/75‑1 TAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGAT > 1:783811/1‑75 AGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATT > 1:1762302/1‑75 ATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTA < 2:1962288/75‑1 TTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTAT > 1:713036/1‑75 TCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATC > 2:314945/1‑75 CTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCC > 1:633936/1‑75 TTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCA > 2:153918/1‑75 TCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCAC > 1:780380/1‑75 GAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCG < 2:784508/75‑1 AAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCG < 2:348632/75‑1 AGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGG > 2:194207/1‑75 AGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGG > 1:578404/1‑75 ATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGG > 1:1265686/1‑75 GCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCT > 1:1053147/1‑75 GCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCT > 2:391047/1‑75 GCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCT > 2:1008166/1‑75 GCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCT > 1:1217850/1‑75 AGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCA > 1:1266257/1‑75 AGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCA < 2:2146489/75‑1 AAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGA > 2:881615/1‑75 AAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGA < 2:1545725/75‑1 AAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGA > 2:192965/1‑75 AAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAG > 1:1082739/1‑75 AAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAG < 1:1495024/75‑1 AAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAG > 2:1982919/1‑75 AATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGG > 1:2066189/1‑75 TGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAA < 1:120079/75‑1 AGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGC > 2:638053/1‑75 AGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGC < 2:41768/75‑1 GCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCT > 2:1905045/1‑75 CTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAG < 2:1957136/75‑1 TTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGA < 2:876686/75‑1 TTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGA > 2:1562777/1‑75 TTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGA > 2:1498011/1‑75 TCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAG < 1:1601992/75‑1 TCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAG > 1:1130781/1‑75 TACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGAT > 1:643295/1‑75 ACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATC < 2:525850/75‑1 ACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATC < 2:1179556/75‑1 CGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCA > 1:787939/1‑75 GAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAA > 2:955554/1‑75 GAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAA > 2:1431375/1‑75 GAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAA > 2:1640424/1‑75 AGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAG > 1:1593766/1‑75 TGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCC < 2:1379064/75‑1 GATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCT > 2:961584/1‑75 ATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTT < 2:780380/75‑1 TTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTA > 2:755111/1‑75 GCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACG > 2:629886/1‑75 GCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACG > 2:313675/1‑75 CCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3912070‑3912148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACG > REL606/3912164‑3912236 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |