| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,912,149 | Δ15 bp | coding (28‑42/99 nt) | ilvL → | ilvG operon leader peptide |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3912148 | 4 (0.060) | 48 (0.820) | 37/130 | 0.6 | 92.8% | coding (27/99 nt) | ilvL | ilvG operon leader peptide |
| ? | REL606 | 3912164 = | 4 (0.070) | coding (43/99 nt) | ilvL | ilvG operon leader peptide | |||||
CCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAA > REL606/3912093‑3912238 | aactctttaggcattccttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcgtgg > 1:876686‑M2/72‑75 (MQ=255)aactctttaggcattccttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcgtgg > 1:704135‑M2/72‑75 (MQ=255) actctttaggcattccttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcgtggt < 1:1545334‑M2/5‑1 (MQ=255) ctttaggcattccttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcgtggtggt < 2:755450‑M2/8‑1 (MQ=255) taggcattccttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGat > 1:783811‑M2/65‑75 (MQ=255) aggcattccttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGatt > 1:1762302‑M2/64‑75 (MQ=255) attccttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGAttatta < 2:1962288‑M2/16‑1 (MQ=255) ttccttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATtattat > 1:713036‑M2/59‑75 (MQ=255) tccttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATc > 2:314945‑M2/58‑75 (MQ=255) cttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATccc > 1:633936‑M2/56‑75 (MQ=255) ttcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCa > 2:153918‑M2/55‑75 (MQ=255) tcgaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCAc > 1:780380‑M2/54‑75 (MQ=255) gaacaagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCg < 2:784508‑M2/24‑1 (MQ=255) aagatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCg < 2:348632‑M2/28‑1 (MQ=255) agatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCgg > 2:194207‑M2/47‑75 (MQ=255) agatgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCgg > 1:578404‑M2/47‑75 (MQ=255) atgcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCgggg > 1:1265686‑M2/45‑75 (MQ=255) gcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCt > 1:1217850‑M2/43‑75 (MQ=255) gcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCt > 2:1008166‑M2/43‑75 (MQ=255) gcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCt > 1:1053147‑M2/43‑75 (MQ=255) gcaagaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCt > 2:391047‑M2/43‑75 (MQ=255) agaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCa < 2:2146489‑M2/36‑1 (MQ=255) agaaaagacaaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCa > 1:1266257‑M2/40‑75 (MQ=255) cccTTCTACGAGTGATTAGCGTGGACGTGATTAGCGTGGTGGTGTTTTTTATCCCACCGTGCGGGGCTGCACTTg > 2:448520/1‑75 (MQ=255) cTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGa < 1:325565/75‑1 (MQ=255) aaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGa < 2:1545725‑M2/45‑1 (MQ=255) aaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGa > 2:192965‑M2/31‑75 (MQ=255) aaaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGa > 2:881615‑M2/31‑75 (MQ=255) aaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAg > 2:1982919‑M2/30‑75 (MQ=255) aaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAg < 1:1495024‑M2/46‑1 (MQ=255) aaatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAg > 1:1082739‑M2/30‑75 (MQ=255) aatgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAgg > 1:2066189‑M2/29‑75 (MQ=255) tgacagcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGaa < 1:120079‑M2/49‑1 (MQ=255) gATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGc > 1:791340/1‑75 (MQ=255) agcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGc < 2:41768‑M2/53‑1 (MQ=255) agcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGc > 2:638053‑M2/23‑75 (MQ=255) gcccttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCt > 2:1905045‑M2/22‑75 (MQ=255) tAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTa < 2:1822626/75‑1 (MQ=255) cttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTag < 2:1957136‑M2/57‑1 (MQ=255) ttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTaga < 2:876686‑M2/58‑1 (MQ=255) ttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTaga > 2:1498011‑M2/18‑75 (MQ=255) ttctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTaga > 2:1562777‑M2/18‑75 (MQ=255) tctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTagag > 1:1130781‑M2/17‑75 (MQ=255) tctacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTagag < 1:1601992‑M2/59‑1 (MQ=255) tacgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGAt > 1:643295‑M2/15‑75 (MQ=255) acgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATc < 2:1179556‑M2/62‑1 (MQ=255) acgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATc < 2:525850‑M2/62‑1 (MQ=255) cgagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCa > 1:787939‑M2/13‑75 (MQ=255) gagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCaa > 2:1640424‑M2/12‑75 (MQ=255) gagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCaa > 2:1431375‑M2/12‑75 (MQ=255) gagtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCaa > 2:955554‑M2/12‑75 (MQ=255) agtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAg > 1:1593766‑M2/11‑75 (MQ=255) tgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGcc < 2:1379064‑M2/67‑1 (MQ=255) gattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCt > 2:961584‑M2/8‑75 (MQ=255) attagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCtt < 2:780380‑M2/69‑1 (MQ=255) ttagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTa > 2:755111‑M2/6‑75 (MQ=255) gcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACg > 2:629886‑M2/3‑75 (MQ=255) gcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACg > 2:313675‑M2/3‑75 (MQ=255) gtggtggtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGaa > 1:529984/1‑75 (MQ=255) | CCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAA > REL606/3912093‑3912238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |