| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3021547 | 45 (0.670) | 4 (0.070) | 3/124 | 8.4 | 9.9% | coding (1138/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | = 3021727 | 35 (0.630) | coding (958/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCT > REL606/3021473‑3021621 | aacaacaacAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTa > 2:1067512/1‑75 (MQ=255) acaacaacaAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTaa > 1:2054920/1‑75 (MQ=255) caacaaGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAatata < 2:1767975/75‑1 (MQ=255) caacaaGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAatata < 1:1875861/75‑1 (MQ=255) acaaGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATAtt < 1:695355/75‑1 (MQ=255) aaGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGa > 1:1898001/1‑75 (MQ=255) agaTATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGActc < 1:1052968/75‑1 (MQ=255) gaTATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGActct < 2:1334208/75‑1 (MQ=255) gaTATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGActct > 1:18456/1‑75 (MQ=255) tCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCttt > 2:1068088/1‑75 (MQ=255) cATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTAtt < 2:1835442/75‑1 (MQ=255) ttCATAAAAAATAATCATCATCCTGCCAACAAGAATATTTTAATATCTTGACTCTAGGAGTTTTGTCTTTAtttt > 1:2039468/1‑75 (MQ=255) cATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCt < 1:2113753/75‑1 (MQ=255) cATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCt < 1:2113742/75‑1 (MQ=255) aTAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCtt > 1:2110203/1‑75 (MQ=255) aaaTAATCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCtt > 1:1937872/1‑75 (MQ=255) aataatCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTc < 1:1254226/75‑1 (MQ=255) aatCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATa > 2:173536/1‑75 (MQ=255) atcatcCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATAcaca > 2:340428/1‑75 (MQ=255) tcatcCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACAt < 1:1296920/75‑1 (MQ=255) tcatcCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACAt < 1:1177433/75‑1 (MQ=255) catcCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATa < 1:471238/75‑1 (MQ=255) ccTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAAtt < 2:2129039/75‑1 (MQ=255) ccTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAAtt < 2:2129028/75‑1 (MQ=255) ccTGACAACAAGAATAGTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAAtt < 2:2129063/75‑1 (MQ=255) tGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTAc < 1:544359/75‑1 (MQ=255) acaacaAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACAt < 1:261892/75‑1 (MQ=255) acaacaAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACAt < 1:552812/75‑1 (MQ=255) acaacaAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACAt < 1:996583/75‑1 (MQ=255) caacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATa > 2:1160369/1‑75 (MQ=255) aacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAg > 2:347699/1‑75 (MQ=255) aacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAg > 1:1369091/1‑75 (MQ=255) aacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAg < 1:529671/75‑1 (MQ=255) aacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAg < 1:2016617/75‑1 (MQ=255) aacaaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAg > 1:1369086/1‑75 (MQ=255) caaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGcc < 1:1602614/75‑1 (MQ=255) caaGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGcc < 1:1602610/75‑1 (MQ=255) gAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCAtt > 2:902235/1‑75 (MQ=255) gAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCAtt < 1:1231531/75‑1 (MQ=255) gAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCAtt > 1:1089343/1‑75 (MQ=255) atatTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGt < 1:1067512/75‑1 (MQ=255) ttAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtct > 1:704924/1‑75 (MQ=255) tAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtctc < 1:917378/75‑1 (MQ=255) tAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtctc < 1:917370/75‑1 (MQ=255) aaTATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtctct < 1:655642/75‑1 (MQ=255) aaTATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATtctct > 2:635602/1‑75 (MQ=255) | AACAACAACAAGAGATATAAATTCTTAATCGCATTCATAAAAAATAATCATCATCCTGACAACAAGAATATTTTAATATATTGACTCTAGGAGTTTTGTCTTTATTTTCTTATCTTCATACACATAATTACATAGCCATTGTATTCTCT > REL606/3021473‑3021621 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |