| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3021547 | 45 (0.670) | 4 (0.070) | 3/124 | 8.4 | 9.9% | coding (1138/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | = 3021727 | 35 (0.630) | coding (958/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAATAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTT > REL606/3021654‑3021793 | gAATAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaat < 2:855556/75‑1 (MQ=255) aaTAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaata < 2:1029004/75‑1 (MQ=255) aaTAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaata < 1:2059731/75‑1 (MQ=255) aTAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaataa > 1:711019/1‑75 (MQ=255) aTAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaataa < 1:2145829/75‑1 (MQ=255) aaGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaataaaa < 2:2054920/75‑1 (MQ=255) gATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCaaataaaata < 1:1552476/75‑1 (MQ=255) atatCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAatat > 2:1030087/1‑75 (MQ=255) atatCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAatat > 2:213688/1‑75 (MQ=255) atCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTc > 1:1139751/1‑75 (MQ=255) gTAATCAATTATATCATTAGGGCATGATGGAATACTTGAGTTACACACCACCTTATCAAATAAAATATTCTtata > 2:1117899/1‑75 (MQ=255) gTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCGCCTTATCAAATAAAATATTCttgtt < 2:1369091/75‑4 (MQ=255) gTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCttgtt < 2:1369086/75‑4 (MQ=255) gTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTtata > 2:1117885/1‑75 (MQ=255) tAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaa < 2:1877881/75‑1 (MQ=255) aaTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaa > 1:1800805/1‑75 (MQ=255) aTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaaa > 2:1200524/1‑75 (MQ=255) cAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTCTCAAATAAAATATTCTTATAAAACg > 2:142051/1‑75 (MQ=255) aaTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACgg > 2:628347/1‑75 (MQ=255) aaTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACgg < 1:879317/75‑1 (MQ=255) aTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgc < 1:496895/75‑1 (MQ=255) ttATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgca < 1:259310/75‑1 (MQ=255) ttATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgca < 1:1769630/75‑1 (MQ=255) ttATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgca < 2:673482/75‑1 (MQ=255) ttATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgca < 1:1769639/75‑1 (MQ=255) atatCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgcagc < 2:1630243/75‑1 (MQ=255) tatCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgcagca > 1:532630/1‑75 (MQ=255) tatCATTAGGGCATGAGGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgcagca < 1:1218648/75‑1 (MQ=255) atCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCAt < 1:1419797/75‑1 (MQ=255) tCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCAtt > 2:2065263/1‑75 (MQ=255) ttAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCtt > 1:693961/1‑75 (MQ=255) tAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCttt > 2:865648/1‑75 (MQ=255) tAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCttt < 1:1614801/75‑1 (MQ=255) tgatgGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGat > 1:1858912/1‑75 (MQ=255) gatgGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGata > 1:435286/1‑75 (MQ=255) atgGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGatat > 1:419135/1‑75 (MQ=255) atgGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGatat > 2:2053536/1‑75 (MQ=255) atgGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGatat > 2:2053567/1‑75 (MQ=255) gAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTa > 1:847106/1‑75 (MQ=255) ttGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCttt > 2:1540943/1‑75 (MQ=255) acacCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGt < 1:157330/75‑1 (MQ=255) accaccTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGttt > 1:1509007/1‑75 (MQ=255) accaccTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGttt > 1:1162902/1‑75 (MQ=255) caccTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTc > 1:1639018/1‑75 (MQ=255) accTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCt > 1:230205/1‑75 (MQ=255) cTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCttt > 1:558104/1‑75 (MQ=255) cTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCttt > 2:556778/1‑75 (MQ=255) | GAATAAGATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTT > REL606/3021654‑3021793 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |