| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 799199 = | 83 (1.280) | 7 (0.120) | 6/138 | 6.6 | 7.4% | coding (77/1146 nt) | ECB_00739 | hypothetical protein |
| ? | REL606 | 799388 = | 100 (1.680) | intergenic (‑113/+671) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGAAGAATATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGATAATATC > REL606/799124‑799273 | atGAAGAATATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCAt > 1:878469/1‑76 (MQ=255)atGAAGAATATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCAt < 1:1569263/76‑1 (MQ=255) gaaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGc < 1:418582/76‑1 (MQ=255) gaaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGc < 1:1372618/76‑1 (MQ=255) aaTATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCa < 1:85788/76‑1 (MQ=255) atatatCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCaa < 2:1713390/76‑1 (MQ=255) tCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATc < 1:1856397/76‑1 (MQ=255) cAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCt > 1:1375349/1‑76 (MQ=255) aaCTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTg > 2:1672847/1‑76 (MQ=255) aCTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGa > 2:93470/1‑76 (MQ=255) aCTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGa < 1:375131/76‑1 (MQ=255) aCTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGa < 2:37297/76‑1 (MQ=255) cTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGaa > 1:474409/1‑76 (MQ=255) cTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGaa > 2:1354691/1‑76 (MQ=255) cTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGaa < 2:1039371/76‑1 (MQ=255) cTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGaa > 2:1960850/1‑76 (MQ=255) tCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAg < 1:539964/76‑1 (MQ=255) ccAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGt > 1:1163551/1‑76 (MQ=255) cAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTg > 2:48164/1‑76 (MQ=255) aGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGTGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATa > 2:1976015/1‑76 (MQ=255) aGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATa < 1:398393/76‑1 (MQ=255) gCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATaa > 2:1005919/1‑76 (MQ=255) cccATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATaaa < 2:1770932/76‑1 (MQ=255) cccATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATaaa < 1:796585/76‑1 (MQ=255) cccATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATaaa < 2:326591/76‑1 (MQ=255) cATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAaac < 2:50130/76‑1 (MQ=255) tCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAaacaac < 1:572652/76‑1 (MQ=255) cccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAacaaca > 1:537644/1‑76 (MQ=255) cccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAacaaca > 2:2067501/1‑76 (MQ=255) ccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAAcaacaa < 1:763262/76‑1 (MQ=255) ccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAAcaacaa < 2:1629312/76‑1 (MQ=255) ccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAAcaacaa < 2:1629314/76‑1 (MQ=255) ccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAAcaacaa < 1:194038/76‑1 (MQ=255) ccAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAAcaacaa > 1:1529950/1‑76 (MQ=255) cAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAg < 1:1223253/76‑1 (MQ=255) cAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAg < 1:1802686/76‑1 (MQ=255) aaaTAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGt < 1:1458394/76‑1 (MQ=255) aataatAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTa > 2:408087/1‑76 (MQ=255) aataatAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTa < 1:1338428/76‑1 (MQ=255) aataatAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTa < 1:1888817/76‑1 (MQ=255) ataataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTaa < 1:732076/76‑1 (MQ=255) ataataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTaa < 1:1925543/76‑1 (MQ=255) ataataGGTCACCCAAATCTTGCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTaa < 1:732079/76‑1 (MQ=255) aataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatg > 1:2023403/1‑76 (MQ=255) ataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatga < 1:1061753/76‑1 (MQ=255) ataGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatga < 1:1854279/76‑1 (MQ=255) taGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatgat > 2:1360968/1‑76 (MQ=255) taGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatgat > 1:1917912/1‑76 (MQ=255) taGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatgat > 2:1433949/1‑76 (MQ=255) taGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatgat < 1:1748071/76‑1 (MQ=255) ggTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGc > 2:1139195/1‑76 (MQ=255) ggTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGc < 1:256046/76‑1 (MQ=255) gTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAatgataca < 2:605924/76‑4 (MQ=255) gTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCt < 1:1692543/76‑1 (MQ=255) gTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCt < 2:1760279/76‑1 (MQ=255) cACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTAt > 1:178577/1‑76 (MQ=255) cAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCct > 1:1277988/1‑76 (MQ=255) cAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCct < 1:73408/76‑1 (MQ=255) cAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCct > 2:2002776/1‑76 (MQ=255) aaaTCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCctc < 2:992544/76‑1 (MQ=255) aaTCTTTCTGAGAGTAGTGCTCATTTAGCAAGAACCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCctct < 1:643311/76‑1 (MQ=255) aTCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTa < 1:925826/76‑1 (MQ=255) aTCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTa < 1:1798717/76‑1 (MQ=255) tCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTaa < 2:733320/76‑1 (MQ=255) tCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTaa < 2:29308/76‑1 (MQ=255) tCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTaa < 2:1137792/76‑1 (MQ=255) tttCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAata > 2:617110/1‑76 (MQ=255) ttCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAatat < 2:447316/76‑1 (MQ=255) tCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAatata > 2:1496376/1‑76 (MQ=255) cTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAatatat < 1:795323/76‑1 (MQ=255) cTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAatatat < 1:258975/76‑1 (MQ=255) agagTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGt > 2:1028059/1‑76 (MQ=255) gagTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTa < 1:2101658/76‑1 (MQ=255) gtagtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAAt > 2:584818/1‑76 (MQ=255) tagtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATg < 1:532978/76‑1 (MQ=255) tagtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATg < 2:534891/76‑1 (MQ=255) tagtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATg > 1:985230/1‑76 (MQ=255) agtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGa > 1:2016440/1‑76 (MQ=255) agtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGa > 1:1551528/1‑76 (MQ=255) agtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGa > 1:2016452/1‑76 (MQ=255) gtGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGat < 1:1030644/76‑1 (MQ=255) tGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGata > 2:996794/1‑76 (MQ=255) aTTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGATAATATc < 2:1861227/76‑1 (MQ=255) | ATGAAGAATATATCAACTCCAGACAGCCCATTCCCAAATAATAGGTCACCCAAATCTTTCTGAGAGTAGTGCTCATTTAGCAAGAATCTGAAGTGGAATAAAACAACAAGTAATGATGCTATTCCTCTAATATATTGTAATGATAATATC > REL606/799124‑799273 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |