| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 799199 = | 83 (1.280) | 7 (0.120) | 6/138 | 6.6 | 7.4% | coding (77/1146 nt) | ECB_00739 | hypothetical protein |
| ? | REL606 | 799388 = | 100 (1.680) | intergenic (‑113/+671) | ECB_00739/ybhB | hypothetical protein/predicted kinase inhibitor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 107 total aligned reads displayed.
GTTGAACTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGTGCGTTATAATTTCA > REL606/799313‑799462 | gTTGAACTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTaaaa < 2:531597/76‑1 (MQ=255) ttGAACTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTaaaaa < 2:1202735/76‑1 (MQ=255) tGAACTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAAt > 1:810734/1‑76 (MQ=255) tGAACTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAAt < 2:1524675/76‑1 (MQ=255) aCTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACa < 1:1483658/76‑1 (MQ=255) aCTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACa < 2:2085639/76‑1 (MQ=255) aCTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACa < 2:590672/76‑1 (MQ=255) cTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACaa > 1:801235/1‑76 (MQ=255) cTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACaa < 1:266497/76‑1 (MQ=255) tATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACaaa > 2:1898333/1‑76 (MQ=255) tATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACaaa < 1:239219/76‑1 (MQ=255) aTTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAag > 2:1007666/1‑76 (MQ=255) ttAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAagag < 1:1980000/76‑1 (MQ=255) tAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAgaga < 1:978353/76‑1 (MQ=255) aTCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATag < 2:719638/76‑1 (MQ=255) aTCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATag > 2:1925487/1‑76 (MQ=255) aTCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATag < 1:1994425/76‑1 (MQ=255) tCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATaga < 2:668468/76‑1 (MQ=255) tCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATaga < 1:1077597/76‑1 (MQ=255) cATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATagaa > 2:1635720/1‑76 (MQ=255) aTTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATagaag < 1:2072705/76‑1 (MQ=255) aTTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATagaag < 1:165336/76‑1 (MQ=255) ttAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATagaaga < 1:909169/76‑1 (MQ=255) ttAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATagaaga < 2:764607/76‑1 (MQ=255) tAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAgaagaa > 2:357272/1‑76 (MQ=255) tAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAgaagaa < 1:360058/76‑1 (MQ=255) aaaCAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaa > 2:296116/1‑76 (MQ=255) aaCAGAAACAACGCCACGTTATATTAGAATGCAATAGGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaac < 1:1307269/76‑1 (MQ=255) aCAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaaca > 2:1486942/1‑76 (MQ=255) aCAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaaca < 1:1972090/76‑1 (MQ=255) aCAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaaca < 1:224943/76‑1 (MQ=255) aCAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaaca > 2:416286/1‑76 (MQ=255) aCAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaaca > 2:176328/1‑76 (MQ=255) aCAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTGCGCTAAAAATACAAAGAGATAGAAGaaaca < 1:517553/76‑1 (MQ=255) cAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaacaa < 2:76255/76‑1 (MQ=255) gAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaacaaaa < 1:724408/76‑1 (MQ=255) gAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaacaaaa > 1:393736/1‑76 (MQ=255) gAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaacaaaa > 1:1818578/1‑76 (MQ=255) aacaacGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaacaaaaca < 1:2101231/76‑1 (MQ=255) aacaacGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaacaaaaca < 2:566737/76‑1 (MQ=255) aacaacGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaacaaaaca < 1:1110551/76‑1 (MQ=255) aacaacGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGaaacaaaaca < 1:1985189/76‑1 (MQ=255) aacaacGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATAAAAAGAGATAGAAGaaacaaaaca < 1:1699732/76‑1 (MQ=255) acaacGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAacac < 1:1237775/76‑1 (MQ=255) acaacGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAacac > 1:625917/1‑76 (MQ=255) caacGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACt > 1:2046108/1‑76 (MQ=255) aacGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACtt < 2:1375349/76‑1 (MQ=255) acGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTg < 1:1005919/76‑1 (MQ=255) acGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTg > 1:1885733/1‑76 (MQ=255) acGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTg > 1:1885717/1‑76 (MQ=255) acGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTg > 1:1885706/1‑76 (MQ=255) acGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTg < 2:474409/76‑1 (MQ=255) gCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTgag < 1:2067501/76‑1 (MQ=255) gCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTgag < 1:518450/76‑1 (MQ=255) gCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTgag > 1:631291/1‑76 (MQ=255) gCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTgag < 2:2032107/76‑1 (MQ=255) cACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGagag > 2:1794892/1‑76 (MQ=255) cACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGagag > 2:205205/1‑76 (MQ=255) cACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGagag > 2:687035/1‑76 (MQ=255) cACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGagag > 2:81386/1‑76 (MQ=255) aCGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAgg > 1:1937829/1‑76 (MQ=255) cGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGt > 1:1417179/1‑76 (MQ=255) cGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGt < 1:408087/76‑1 (MQ=255) cGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGt > 1:1417192/1‑76 (MQ=255) ttATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTaa < 1:1090882/76‑1 (MQ=255) ttATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTaa < 1:461275/76‑1 (MQ=255) ttATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTaa < 2:1529950/76‑1 (MQ=255) ttATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGCTaa < 1:1090902/76‑1 (MQ=255) tataTTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTaaa > 1:885942/1‑76 (MQ=255) tataTTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTaaa < 2:402765/76‑1 (MQ=255) atatTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTaaaa < 1:984737/76‑1 (MQ=255) atatTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTaaaa > 1:1368414/1‑76 (MQ=255) atatTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTaaaa < 2:2023403/76‑1 (MQ=255) tatTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTaaaaa > 2:2045185/1‑76 (MQ=255) atTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAaat < 1:159260/76‑1 (MQ=255) atTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAaat < 1:1994247/76‑1 (MQ=255) ttAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAaata > 1:614753/1‑76 (MQ=255) tAGAATGCAATATGGCATACTTTCGCTGAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAaataa < 1:1821321/76‑1 (MQ=255) tAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAaataa > 1:1119524/1‑76 (MQ=255) aGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAaataat > 1:916033/1‑76 (MQ=255) gAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATc < 1:1354691/76‑1 (MQ=255) gAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATc < 2:1277988/76‑1 (MQ=255) aTGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCaa > 1:1167533/1‑76 (MQ=255) tGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCaaa > 2:1975726/1‑76 (MQ=255) tGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCaaa < 2:515210/76‑1 (MQ=255) cAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCaaaaa < 2:1917912/76‑1 (MQ=255) cAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCaaaaa > 1:1491463/1‑76 (MQ=255) aaTATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAAt > 2:107430/1‑76 (MQ=255) tGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACa > 1:1926519/1‑76 (MQ=255) tGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACa > 1:1926493/1‑76 (MQ=255) ggCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACaa > 1:262087/1‑76 (MQ=255) gCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAg > 1:1162165/1‑76 (MQ=255) cATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGt > 1:1060543/1‑76 (MQ=255) ttCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGTGCGTta > 1:1085488/1‑76 (MQ=255) gCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGTGCGTTATaa > 1:1028108/1‑76 (MQ=255) cTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGTGCGTTATAAt > 2:1304222/1‑76 (MQ=255) aaaaTACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGTGCGTTATAATTTc > 1:1338479/1‑76 (MQ=255) aaaaTACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGTGCGTTATAATTTc < 1:1139195/76‑1 (MQ=255) aaaaTACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGTGCGTTATAATTTc > 1:62761/1‑76 (MQ=255) aaaTACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGTGCGTTATAATTTCa > 2:641829/1‑76 (MQ=255) | GTTGAACTATTTAAATCATTAAACAGAAACAACGCCACGTTATATTAGAATGCAATATGGCATACTTTCGCTAAAAATACAAAGAGATAGAAGAAACAAAACACTTGAGAGGTAAAAATAATCAAAAATTACAAGTGCGTTATAATTTCA > REL606/799313‑799462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |