New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	2199003 =	6 (0.100)	64 (1.050)	48/150	0.2	91.4%	coding (768/1470 nt)	lysP	lysine transporter
	?	REL606	= 2199011	NA (NA)					coding (760/1470 nt)	lysP	lysine transporter

AAGATCCGGCGAAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2199076‑2199003 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATGTTAAAG  <  REL606/2199011‑2198939                                                                                                                                                     AAGATCCGGCGAAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGT                                                                         >  2:157318/1‑76    ATCCGGCGAAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTT                                                                      >  2:1151985/1‑76    ATCCGGCGAAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTT                                                                      <  1:129767/76‑1    ATCCGGCGAAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTT                                                                      >  2:1510380/1‑76            AAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCC                                                              >  2:1211400/1‑76            AAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCC                                                              >  2:1594700/1‑76             AAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCT                                                             <  2:997081/76‑1             AAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCT                                                             <  1:1309474/76‑1             AAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCT                                                             <  2:735524/76‑1              AAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTG                                                            <  2:511826/76‑1               AACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGA                                                           >  1:1732315/1‑76                  gTTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTA                                                        <  2:498353/75‑1                  ATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTA                                                        <  1:1491724/76‑1                   TTCCCCGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTAT                                                       <  1:636189/76‑1                   TTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTAT                                                       <  2:407749/76‑1                     CCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCA                                                     <  1:195748/76‑1                     CCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCA                                                     >  2:843439/1‑76                     CCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCA                                                     <  2:940911/76‑1                     CCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCA                                                     <  1:861626/76‑1                      CACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAG                                                    >  2:1285640/1‑76                      CACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAG                                                    <  2:1195927/76‑1                      CACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTGCGCGGTGTTTGCGATCCTGATTATCAG                                                    <  2:1195915/76‑1                        CGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCC                                                  >  1:1787592/1‑76                          CGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTC                                                >  2:1479320/1‑76                          CGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTC                                                <  2:527708/76‑1                            CGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCAT                                              <  1:1151985/76‑1                             GGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATT                                             <  2:1732315/76‑1                              GTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTA                                            <  1:848348/76‑1                              GTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTA                                            <  1:226285/76‑1                               TACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTAT                                           <  2:637365/76‑1                                 CGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTC                                         <  2:704541/76‑1                                    CAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGT                                      <  2:371938/76‑1                                    CAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGT                                      >  1:302742/1‑76                                    CAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGT                                      >  1:17724/1‑76                                    CAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGT                                      >  1:1542840/1‑76                                     AGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTA                                     <  2:1797200/76‑1                                     AGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTA                                     <  2:158171/76‑1                                     AGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTA                                     >  1:589375/1‑76                                       GTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACA                                   >  1:1172205/1‑76                                         GTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACC                                 <  2:410181/76‑1                                             TGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATC                             >  2:1447439/1‑76                                             TGGCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATC                             <  1:735344/76‑1                                              GGCGATTCCTGTTGTTCTATGTGTTCTCTGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCC                            <  1:136571/76‑1                                               GCGAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCG                           >  1:1344609/1‑76                                                 GAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAG                         <  2:798499/76‑1                                                 GAATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAG                         <  2:1917158/76‑1                                                   ATCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTCCACCGATCCGAGCC                       >  1:1930431/1‑76                                                    TCCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCT                      <  1:682142/76‑1                                                     CCTGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTG                     >  1:767683/1‑76                                                       TGTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCT                   <  2:1943882/76‑1                                                        GTTGTTCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGCACACAGATCCGAGCCTGCTG                  >  1:324434/1‑76                                                             TCTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAA             <  2:758794/76‑1                                                              CTATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAAC            >  1:811916/1‑76                                                               TATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACG           >  1:989353/1‑76                                                                ATGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGA          >  2:750985/1‑76                                                                 TGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGAT         >  2:1133106/1‑76                                                                 TGTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGAT         <  1:249528/76‑1                                                                  GTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATG        <  1:1428154/76‑1                                                                  GTGTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATG        <  2:1285599/76‑1                                                                    GTTCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATGTT      >  2:1467438/1‑76                                                                      TCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATGTTAA    <  2:1548139/76‑1                                                                      TCGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATGTTAA    <  1:1184580/76‑1                                                                       CGCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATGTTAAA   <  1:1580407/76‑1                                                                        GCGGTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATGTTAAAG  <  1:883581/76‑1                                                                                                                                                     AAGATCCGGCGAAAAACATTCCACGCGCGGTACGTCAGGTGTTCTGGCGAATCCTGTTGTTCTATGTGTTCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2199076‑2199003 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGTTCGCGATCCTGATTATCAGCCTCATTATTCCGTACACCGATCCGAGCCTGCTGCGTAACGATGTTAAAG  <  REL606/2199011‑2198939

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.