| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2039480 | 116 (1.890) | 18 (0.330) | 12/134 | 3.6 | 18.1% | coding (215/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | = 2039680 | 60 (1.100) | coding (15/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 116 total aligned reads displayed.
CTAGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATG > REL606/2039406‑2039555 | ctaGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATc < 1:153108/76‑1 (MQ=255)ctaGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATc < 1:153084/76‑1 (MQ=255)ctaGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATc < 1:464303/76‑1 (MQ=255) taGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCg > 1:1353854/1‑76 (MQ=255) aGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGa < 1:1276529/76‑1 (MQ=255) cATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCaa < 1:330790/76‑1 (MQ=255) cATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCaa < 1:1839023/76‑1 (MQ=255) cATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCaa < 1:718892/76‑1 (MQ=255) cATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCaa < 1:330810/76‑1 (MQ=255) ttCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAg < 1:1924989/76‑1 (MQ=255) ttCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAg < 1:603171/76‑1 (MQ=255) aTGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGata > 2:1330093/1‑76 (MQ=255) tGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGatat < 1:1505965/76‑1 (MQ=255) gCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGAtata < 2:1382982/76‑1 (MQ=255) gCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGAtata < 1:1434094/76‑1 (MQ=255) gCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGAtata < 1:1739275/76‑1 (MQ=255) cTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATaa < 1:1123490/76‑1 (MQ=255) cTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATaa < 1:1123488/76‑1 (MQ=255) gcgcTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGa < 1:557794/76‑1 (MQ=255) tGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTa < 1:981496/76‑1 (MQ=255) gATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTaa < 1:1612265/76‑1 (MQ=255) aTCTCCTCCATTGATTATGGATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAg < 1:1694030/76‑1 (MQ=255) aTCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAg < 1:1694013/76‑1 (MQ=255) aTCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAg < 1:1142289/76‑1 (MQ=255) aTCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAg > 2:259573/1‑76 (MQ=255) tctcCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAgg > 2:1297638/1‑76 (MQ=255) tctcCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAgg < 1:1043525/76‑1 (MQ=255) tctcCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAgg < 1:82300/76‑1 (MQ=255) ctcctcCATTTATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGa < 1:509887/76‑1 (MQ=255) ctcctcCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGa < 1:327117/76‑1 (MQ=255) ctcctcCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGa < 1:1403608/76‑1 (MQ=255) ctcctcCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGa < 1:1399217/76‑1 (MQ=255) tcctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGaa < 1:964810/76‑1 (MQ=255) cctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAg < 1:40173/76‑1 (MQ=255) ctccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGc < 1:1951466/76‑1 (MQ=255) tccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCa < 1:99448/76‑1 (MQ=255) tccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCa < 1:1160535/76‑1 (MQ=255) tccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCa < 1:810085/76‑1 (MQ=255) tccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCa < 1:1847171/76‑1 (MQ=255) tccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCa < 1:191539/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:1431915/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:827263/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:1933162/76‑1 (MQ=255) ccATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCaa < 1:827249/76‑1 (MQ=255) cATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAAc > 1:1825563/1‑76 (MQ=255) aTTGATTATGTATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACg < 1:503908/76‑1 (MQ=255) aTTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACg > 1:1091002/1‑76 (MQ=255) tGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGtt > 1:985578/1‑76 (MQ=255) tGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGtt > 1:456965/1‑76 (MQ=255) gATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGttt > 1:1005433/1‑76 (MQ=255) gATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGttt > 2:1480880/1‑76 (MQ=255) aTTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTa > 1:1927393/1‑76 (MQ=255) aTTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTa > 1:1247976/1‑76 (MQ=255) aTTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTa > 1:643056/1‑76 (MQ=255) aTTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTa > 1:617137/1‑76 (MQ=255) aTTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTa > 1:1862649/1‑76 (MQ=255) ttATGAATATCTTTTTATTATTGATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTaa > 1:1697342/1‑76 (MQ=255) ttATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTaa > 1:1697357/1‑76 (MQ=255) ttATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTaa > 1:1567764/1‑76 (MQ=255) ttATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTaa < 1:574849/76‑1 (MQ=255) ttATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGGTGATATAACGGATCTAAGGAAGCAACGTTTaa < 1:574864/76‑1 (MQ=255) gAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGAt > 1:96864/1‑76 (MQ=255) aaTATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATc > 1:1179020/1‑76 (MQ=255) taatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATcc > 2:1663857/3‑76 (MQ=255) atatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATcc < 1:93794/76‑1 (MQ=255) tatTTTTTTATTATTAATATAGATTTTTTAAAAGTGTTAATATAACGAATCAAAGGAAGCAACGTTTAATGACCCa < 2:1088029/76‑1 (MQ=255) tatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATcat < 2:1697666/76‑3 (MQ=255) tatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCa > 1:497950/1‑76 (MQ=255) tatCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCa > 1:1626169/1‑76 (MQ=255) atCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCAt > 1:763782/1‑76 (MQ=255) tCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATc > 1:1084126/1‑76 (MQ=255) tCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATc > 1:1062827/1‑76 (MQ=255) cTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCa > 1:618907/1‑76 (MQ=255) cTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCa > 1:1372869/1‑76 (MQ=255) cTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCa > 1:302194/1‑76 (MQ=255) cTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCa > 1:1064336/1‑76 (MQ=255) cTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCa > 1:102584/1‑76 (MQ=255) tttATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaaaa < 1:372626/76‑1 (MQ=255) ttattaTTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCaaaaa < 1:1172702/76‑1 (MQ=255) tttattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGTAGCAACGTTTAATGATCCATCAACAATa > 2:967364/2‑76 (MQ=255) attattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATa < 1:1656428/76‑1 (MQ=255) attattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATa < 1:1921314/76‑1 (MQ=255) ttattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaa > 1:661524/1‑76 (MQ=255) tattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaaa > 1:932556/1‑76 (MQ=255) tattCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaaa > 1:932568/1‑76 (MQ=255) attCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATaaaa < 1:110578/76‑1 (MQ=255) ttCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAg < 1:1066302/76‑1 (MQ=255) ttCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATAAAAAATAAAAg < 1:721941/76‑1 (MQ=255) cATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTa > 1:897580/1‑76 (MQ=255) cATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTa < 1:1386409/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa < 1:240940/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa < 1:1752378/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa < 1:708951/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaa < 1:803719/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGCaa < 1:803705/76‑1 (MQ=255) atatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAAT‑AAAGTaaa < 1:28817/76‑1 (MQ=255) tatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaaa < 1:1808029/76‑1 (MQ=255) tatCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTaaa < 1:819188/76‑1 (MQ=255) atCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAAt < 1:133486/76‑1 (MQ=255) tCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATg < 1:149920/76‑1 (MQ=255) | CTAGTTTTACGCATTCACGCCATGCTTTGCGCTGATCTCCTCCATTGATTATGAATATCTTTTTATTATTCATATCGATATTTTCAAAGTGTTGATATAACGGATCTAAGGAAGCAACGTTTAATGATCCATCAAAAATAAAAGTAAATG > REL606/2039406‑2039555 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |