| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2039480 | 116 (1.890) | 18 (0.330) | 12/134 | 3.6 | 18.1% | coding (215/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | = 2039680 | 60 (1.100) | coding (15/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTT > REL606/2039605‑2039754 | aaaaCAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAaaataa > 2:1279928/1‑76 (MQ=255) aCAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAaataaata < 1:376832/76‑1 (MQ=255) aCAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAaataaata < 1:535545/76‑1 (MQ=255) cATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAAtaat < 2:768937/76‑4 (MQ=255) tGACTAAACCCCTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTca < 1:789059/76‑1 (MQ=255) tGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTca < 1:1184542/76‑1 (MQ=255) tGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTca < 1:1419911/76‑1 (MQ=255) tGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTca > 1:1355438/1‑76 (MQ=255) cagcTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTca > 2:767202/4‑76 (MQ=255) gACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCTAAAATAAATATGAATCTTcac < 2:453152/76‑1 (MQ=255) gACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTcac < 1:799104/76‑1 (MQ=255) agcTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTcac > 2:1488961/3‑76 (MQ=255) agcTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTcac > 2:793969/3‑76 (MQ=255) agcTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTcac > 2:83246/3‑76 (MQ=255) tAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGa < 1:1290836/76‑1 (MQ=255) tAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGa < 1:1625425/76‑1 (MQ=255) aCCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTa < 2:224866/76‑1 (MQ=255) aCCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTa < 1:1663857/76‑1 (MQ=255) ccACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTAt > 2:1075359/1‑76 (MQ=255) cTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTAtctc < 1:671614/76‑1 (MQ=255) tCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTcc < 1:461408/76‑1 (MQ=255) cAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCa < 1:937301/76‑1 (MQ=255) aGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCaa < 2:496279/76‑1 (MQ=255) ggCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAAt < 1:831076/76‑1 (MQ=255) ggCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAAt < 1:841999/76‑1 (MQ=255) ccGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAg < 1:261493/76‑1 (MQ=255) ccGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAg < 1:261472/76‑1 (MQ=255) ccGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAg < 1:197842/76‑1 (MQ=255) ccGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAg < 2:1372869/76‑1 (MQ=255) tctttttAGTTGTCCGACTAATATCCGTATGCCGAAAATAACTATCAATCTACACAGATTATCTCCAATAGCGCtt > 2:177847/3‑76 (MQ=255) tctttttAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCtt > 2:177833/3‑76 (MQ=255) tttttAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTgg < 1:1678534/76‑1 (MQ=255) tttttAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTgg < 1:1678512/76‑1 (MQ=255) tAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTa < 2:1911162/76‑1 (MQ=255) ttGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAAt < 1:1611622/76‑1 (MQ=255) tGTCCGATTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATa > 1:1687685/1‑76 (MQ=255) tGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATa > 1:1321536/1‑76 (MQ=255) tGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATa > 1:1321531/1‑76 (MQ=255) tGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATa > 1:1687666/1‑76 (MQ=255) gTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATAc < 2:1353875/76‑1 (MQ=255) gTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATAc < 2:1353854/76‑1 (MQ=255) cGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGa < 1:1550092/76‑1 (MQ=255) cGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGa < 1:1550102/76‑1 (MQ=255) cGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGa < 1:1550069/76‑1 (MQ=255) aCTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGAtt < 2:880879/76‑1 (MQ=255) aCTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGAtt < 1:1297638/76‑1 (MQ=255) ctgatatCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTc > 1:1397210/4‑76 (MQ=255) cTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTc > 1:994306/1‑76 (MQ=255) atatCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAg > 2:109003/1‑76 (MQ=255) atatCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAg < 2:770808/76‑1 (MQ=255) atCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCt < 1:1152854/76‑1 (MQ=255) tATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCaat > 1:1940449/1‑76 (MQ=255) ntGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCaata > 1:85538/2‑76 (MQ=255) aTGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCaata < 1:1348480/76‑1 (MQ=255) tGCCGAAAGTAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATATAGATTCACGCTACaataa > 1:931559/1‑76 (MQ=255) aataaataTGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTg > 1:1211476/1‑76 (MQ=255) ataaataTGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGc > 1:740148/1‑76 (MQ=255) ataaataTGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGc > 1:1564378/1‑76 (MQ=255) ataaataTGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGc > 1:1564382/1‑76 (MQ=255) ataaataTGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGc > 2:1045648/1‑76 (MQ=255) ataaataTGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGc > 2:814519/1‑76 (MQ=255) tgaataTGAATCTTCACAGATTATCT‑CAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAAAAATTTCTTGctt > 1:736049/3‑76 (MQ=255) taaataTGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATATAGATTCAAGCTCCAATAATTTCTTGct > 1:123732/1‑76 (MQ=255) taaataTGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGct > 1:123716/1‑76 (MQ=255) | AAAACAATTTTCATGACTAAACCACTCAGGCCGATTATTTTTAGTTGTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTT > REL606/2039605‑2039754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |