| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3021053 | 89 (1.450) | 11 (0.200) | 8/132 | 4.8 | 12.8% | coding (431/933 nt) | ECB_02820 | hypothetical protein |
| ? | REL606 | = 3021314 | 71 (1.320) | coding (170/933 nt) | ECB_02820 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAACCGATGTAGCT > REL606/3021243‑3021389 | tattaGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAg > 2:402496/1‑76 (MQ=255)tattaGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAg > 1:1535081/1‑76 (MQ=255) taGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGAcc < 1:142140/76‑1 (MQ=255) aGATTCGTCAACAAGCAAAAGATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCa > 1:1848648/1‑76 (MQ=255) aGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCa > 1:18608/1‑76 (MQ=255) gATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCAt < 1:1001026/76‑1 (MQ=255) gATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCAt < 2:1733207/76‑1 (MQ=255) gATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCAt < 1:1253467/76‑1 (MQ=255) aTTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATc > 2:296410/1‑76 (MQ=255) ttCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCa < 2:654145/76‑1 (MQ=255) tCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATTAg < 1:1411681/76‑1 (MQ=255) tCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAg < 1:1107571/76‑1 (MQ=255) tCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAg < 1:1411663/76‑1 (MQ=255) tCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAg < 1:1411671/76‑1 (MQ=255) tCGTCAAAAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTGCCTGTTACATGTAGTGTGTATAGACCATTAg < 1:670755/76‑1 (MQ=255) tCGTCAAAAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAg < 1:1595789/76‑1 (MQ=255) tCGTCAAAAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAg < 1:670741/76‑1 (MQ=255) cGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGt > 1:1413174/1‑76 (MQ=255) tCAGCAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCCTCAGttt > 1:639700/1‑76 (MQ=255) tCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGttt > 1:639674/1‑76 (MQ=255) caacaaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGtttt > 2:1406669/1‑76 (MQ=255) aacaaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTa < 1:758290/76‑1 (MQ=255) caaGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTatc > 1:740450/1‑76 (MQ=255) gCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCTTGTTACATGTAGTGTGTATAGACCATCAGTTTTatcacg < 2:1823740/76‑3 (MQ=255) gCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTatcacg < 2:577744/76‑3 (MQ=255) gCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTatcacg < 2:940127/76‑3 (MQ=255) cAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTAtcatca < 1:1608968/76‑1 (MQ=255) cAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTAtcatca < 1:1561206/76‑1 (MQ=255) aaaaaaTAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCatcaa < 2:1028206/76‑1 (MQ=255) aaaaaaTAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCatcaa < 1:82481/76‑1 (MQ=255) aaaTAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCatcaatca < 2:2336/76‑1 (MQ=255) aataatTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATcac > 2:199481/1‑76 (MQ=255) aataatTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATcac < 1:859372/76‑1 (MQ=255) aataatTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATcac < 1:638432/76‑1 (MQ=255) aataatTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATcac > 1:59887/1‑76 (MQ=255) tcatTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACaa > 2:854174/3‑76 (MQ=255) taatTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACaa < 2:1663237/76‑1 (MQ=255) catTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAg > 2:1800818/2‑76 (MQ=255) catTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAg > 2:1800806/2‑76 (MQ=255) tttACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGAc > 1:1137063/1‑76 (MQ=255) ttACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTATGTATAGACCATCAGTTTTATCATCAATCACAAGAcc > 2:683506/1‑76 (MQ=255) tACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCt > 1:734608/1‑76 (MQ=255) aCAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCtt < 2:1927783/76‑1 (MQ=255) cAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTg < 2:857708/76‑1 (MQ=255) cTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGt > 1:594592/1‑76 (MQ=255) tCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTa < 2:89365/76‑1 (MQ=255) cTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAAc > 1:917105/1‑76 (MQ=255) cTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAAc < 2:356941/76‑1 (MQ=255) cTTTTTCTAGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAAc > 1:917099/1‑76 (MQ=255) ttttCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGt > 1:867600/1‑76 (MQ=255) tttCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGtg < 2:960504/76‑2 (MQ=255) tttCTAGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGtt > 1:1249023/1‑76 (MQ=255) ttCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTa > 1:1933899/1‑76 (MQ=255) tCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTAt < 1:119735/76‑1 (MQ=255) cTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTAtt > 2:470700/1‑76 (MQ=255) tGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTc < 1:332335/76‑1 (MQ=255) gTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCtt < 2:1327791/76‑1 (MQ=255) gTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCtt < 2:1859520/76‑1 (MQ=255) tttCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTa > 1:1755196/1‑76 (MQ=255) tttCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTa > 1:1380473/1‑76 (MQ=255) tttCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTa < 2:116312/76‑1 (MQ=255) ttCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTAc > 1:50198/1‑76 (MQ=255) ttCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTAc < 1:938051/76‑1 (MQ=255) ttCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTAc < 1:1350092/76‑1 (MQ=255) ccTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCtt > 1:81061/1‑76 (MQ=255) cTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCttt > 1:1469695/1‑76 (MQ=255) gTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTcc < 2:35660/76‑1 (MQ=255) ttACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTccc > 1:576340/1‑76 (MQ=255) ttACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTccc > 1:850547/1‑76 (MQ=255) cATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCaa > 1:983211/1‑76 (MQ=255) aTGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAAc < 1:976116/76‑1 (MQ=255) tGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAAcc > 2:1253385/1‑76 (MQ=255) tgtgtATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAACCGATGt < 2:523527/76‑1 (MQ=255) tgtgtATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAACCGATGt < 2:792362/76‑1 (MQ=255) tgtgtATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAACCGATGt > 2:1493614/1‑76 (MQ=255) gtgtATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAACCGATGTa < 2:128509/76‑1 (MQ=255) tgtATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAACCGATGTAg < 2:867600/76‑1 (MQ=255) tgtATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAACCGATGTAg < 1:494178/76‑1 (MQ=255) tataGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAACCGATGTAGCt < 2:18608/76‑1 (MQ=255) | TATTAGATTCGTCAACAAGCAAAAAATAATTTACAACTCCTTTTTCTGGTTTCCCTGTTACATGTAGTGTGTATAGACCATCAGTTTTATCATCAATCACAAGACCTTGAGTAACGTTATTCTTACCTTTCCCCAACCGATGTAGCT > REL606/3021243‑3021389 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |