| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3582336 | 76 (1.240) | 14 (0.250) | 9/140 | 4.8 | 16.7% | coding (356/1224 nt) | yhiS | hypothetical protein |
| ? | REL606 | = 3582485 | 69 (1.210) | coding (505/1224 nt) | yhiS | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGA > REL606/3582411‑3582557 | tCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAAttt > 1:779707/1‑76 (MQ=255) cATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAAtttt < 2:687764/76‑1 (MQ=255) aaCTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATattatt < 1:1111180/76‑1 (MQ=255) aaCTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAtt > 2:1210318/1‑76 (MQ=255) aaCTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAtt < 1:1623491/76‑1 (MQ=255) cTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGc > 1:691516/1‑76 (MQ=255) cTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGc > 1:842508/1‑76 (MQ=255) cTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGc > 2:766261/1‑76 (MQ=255) cTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATGTTAttaa < 2:1504758/76‑3 (MQ=255) tAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTAttaat < 2:1244498/76‑4 (MQ=255) tAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCt < 1:765381/76‑1 (MQ=255) tAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCt < 1:765402/76‑1 (MQ=255) aaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaa < 1:1466027/76‑1 (MQ=255) aaTTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaa < 1:1081749/76‑1 (MQ=255) tAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaacaa > 2:524044/1‑76 (MQ=255) aGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGaacaac > 1:320075/1‑76 (MQ=255) gCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACg < 1:725137/76‑1 (MQ=255) cGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGa < 2:1410093/76‑1 (MQ=255) gTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAg < 2:490586/76‑1 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt < 1:1620387/76‑1 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 2:952751/1‑76 (MQ=255) agaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCt > 2:1110803/1‑76 (MQ=255) gaagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTg < 2:1127069/76‑1 (MQ=255) aagaGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGa < 2:414553/76‑1 (MQ=255) aagaGGGAATACCCATAACATTCAGTGTCC‑AACCATGGTTTTAGGTAATTATTTTATTGCTGAACCACCAACTGAc > 2:844002/1‑76 (MQ=255) agagGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGAc > 2:955698/1‑76 (MQ=255) gagGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACt < 1:1041626/76‑1 (MQ=255) gagGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACt > 2:367769/1‑76 (MQ=255) gggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTa > 2:924736/1‑76 (MQ=255) ggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTAc > 2:628607/1‑76 (MQ=255) ggAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTAc > 2:628628/1‑76 (MQ=255) gAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTAcc < 1:847998/76‑1 (MQ=255) gAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTAcc < 1:1679786/76‑1 (MQ=255) aaTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCa < 1:1017649/76‑1 (MQ=255) aTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCaa < 2:598395/76‑1 (MQ=255) aTACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCaa > 2:916246/1‑76 (MQ=255) aCCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACt > 2:1783222/1‑76 (MQ=255) aCCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACt > 1:339987/1‑76 (MQ=255) aCCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACt > 2:1388713/1‑76 (MQ=255) cccATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTa > 1:1470789/1‑76 (MQ=255) aTAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAata < 1:76453/76‑1 (MQ=255) tAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAatat < 2:1342678/76‑1 (MQ=255) tAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAatat < 2:1220693/76‑1 (MQ=255) aaCATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAAtata > 1:1472133/1‑76 (MQ=255) cATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATaaa < 1:1534091/76‑1 (MQ=255) cATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATaaa > 1:1130583/1‑76 (MQ=255) cATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATaaa > 2:1483308/1‑76 (MQ=255) aTTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATaaaa > 1:1829421/1‑76 (MQ=255) cAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGat > 1:561565/1‑76 (MQ=255) tgtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATAtt < 2:1383833/76‑1 (MQ=255) tgtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATAtt < 2:1383838/76‑1 (MQ=255) tgtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATAtt > 1:479135/1‑76 (MQ=255) tgtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATAtt < 2:1602007/76‑1 (MQ=255) tgtCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATAtt < 2:1602023/76‑1 (MQ=255) ccAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCaa < 2:1131390/76‑1 (MQ=255) ccAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCaa > 1:1775061/1‑76 (MQ=255) aaaCCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAg > 2:1084944/1‑76 (MQ=255) ccATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCt > 1:885659/1‑76 (MQ=255) gTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTAt < 2:1321560/76‑1 (MQ=255) ttttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATc > 1:286485/1‑76 (MQ=255) ttttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATc > 1:286468/1‑76 (MQ=255) ttttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATc < 1:16045/76‑1 (MQ=255) ttttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATc > 2:937868/1‑76 (MQ=255) ttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCaa > 1:813416/1‑76 (MQ=255) ttCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCaa > 1:1656112/1‑76 (MQ=255) tCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCaaa > 1:737304/1‑76 (MQ=255) tCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCaaa > 1:692168/1‑76 (MQ=255) cAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCaaaa > 1:79898/1‑76 (MQ=255) tACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATg < 2:406100/76‑1 (MQ=255) tACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATg < 1:1536250/76‑1 (MQ=255) tACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATg < 1:1536266/76‑1 (MQ=255) tAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATGTAAAAGATATTCAAAGCCTGTATCAAAAAATGACg < 1:1679399/76‑1 (MQ=255) tAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATGTAAAAGATATTCAAAGCCTGTATCAAAAAATGACg < 1:1679385/76‑1 (MQ=255) tAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACg < 1:980964/76‑1 (MQ=255) aaTTTTATTGCTTATAACCTATTTGACTTATTAACTACTATAAACGATATTGACTGCCTGTATCAACACATGAcct > 2:987877/1‑74 (MQ=255) aaTTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGa > 2:987863/1‑76 (MQ=255) | TCATAACTAAAATTAGCGTAGAAGAGGGAATACCCATAACATTCAGTGTCCAAACCATGTTTTCAGATACTAATTTTATTGCTGAACAACGAGCTGACTTACCAACTAATATAAAAGATATTCAAAGCCTGTATCAAAAAATGACGA > REL606/3582411‑3582557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |