| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 2,100,308 | Δ22,146 bp | ogrK–[ECB_02013] | 27 genes ogrK, yegZ, ECB_01989, ECB_01990, ECB_01991, ECB_01992, ECB_01993, ECB_01994, ECB_01995, ECB_01996, ECB_01997, ECB_01998, ECB_01999, ECB_02000, ECB_02001, ECB_02002, ECB_02003, ECB_02004, ECB_02005, ECB_02006, ECB_02007, ECB_02008, ECB_02009, ECB_02010, ECB_02011, ECB_02012, [ECB_02013] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 2100308 | 2122453 | 22146 | 76 [1] | [4] 76 | ogrK–[ECB_02013] | ogrK,yegZ,ECB_01989,ECB_01990,ECB_01991,ECB_01992,ECB_01993,ECB_01994,ECB_01995,ECB_01996,ECB_01997,ECB_01998,ECB_01999,ECB_02000,ECB_02001,ECB_02002,ECB_02003,ECB_02004,ECB_02005,ECB_02006,ECB_02007,ECB_02008,ECB_02009,ECB_02010,ECB_02011,ECB_02012,[ECB_02013] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2100307 | 1 (0.020) | 62 (1.530) | 43/104 | 0.0 | 96.4% | intergenic (+171/+102) | yegQ/ogrK | predicted peptidase/phage DNA‑binding transcriptional regulator |
| ? | REL606 | 2122454 = | 4 (0.100) | coding (172/216 nt) | ECB_02013 | conserved hypothetical protein; putative exported protein | |||||
Only 100 of 101 total aligned reads displayed.
CATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2100211‑2100307‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccttacacgggcttattttttTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC > REL606/2122454‑2122528 CATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTC > 1:334910/1‑76 ATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCC > 1:421861/1‑76 CCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCT > 1:1090406/1‑76 CCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCT < 2:224630/76‑1 CGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTT < 1:1057953/76‑1 CGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTT > 1:1003088/1‑76 CGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTT < 1:254068/76‑1 CGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTT < 2:790733/76‑1 GTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTA < 2:1279349/76‑1 GTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTA > 1:77875/1‑76 GTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTA > 1:1391055/1‑76 TTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTAC < 2:1596517/76‑1 TTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACA > 1:392519/1‑76 TTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACA > 1:1119199/1‑76 TCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACAC > 2:1501401/1‑76 CGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACG < 1:321947/76‑1 CTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGG < 1:1608925/76‑1 TGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGC < 2:1720849/76‑1 GAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCT > 1:1284238/1‑76 GAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCT > 2:1053404/1‑76 GAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCT > 1:1347376/1‑76 AAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTT < 1:847791/76‑1 AAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTA < 1:1748918/76‑1 AACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTACCTTACACGGGCTTATT < 1:1588459/76‑1 ATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTT > 1:323672/1‑76 ATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTT < 2:564878/76‑1 TAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTT > 2:1223865/1‑76 TAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTT < 2:1770917/76‑1 TAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTT > 2:19861/1‑76 AACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTT > 2:620455/1‑76 AACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTT > 2:1338146/1‑76 ATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCA > 2:696527/1‑76 AAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATA > 2:827135/1‑76 AAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAA < 2:1309782/76‑1 AAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAA < 1:1545055/76‑1 AATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAG < 1:1865592/76‑1 ATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGC < 1:171628/76‑1 TGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCC > 1:906179/1‑76 TGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCC < 1:133574/76‑1 TGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCC > 1:168483/1‑76 CTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCT > 2:1765283/1‑76 TAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTA < 2:1294437/76‑1 AGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTAT < 2:158702/76‑1 AGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTAT < 1:1806791/76‑1 AGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTAT < 2:1402316/76‑1 TGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTC > 1:1567663/1‑76 GTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCT > 2:340024/1‑76 GTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCT > 2:1374170/1‑76 TACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTG > 2:109540/1‑76 TACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTG < 1:923569/76‑1 TACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTG < 1:923556/76‑1 ACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGG > 1:1554617/1‑76 CCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGT < 1:1632246/76‑1 CAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTA > 2:1549260/1‑76 CAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTA > 2:1652058/1‑76 CAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTA > 1:550137/1‑76 AGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAA > 2:1661154/1‑76 AGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTGTTTATGCATAAGCCCTATCTCTGGTAA < 1:229200/76‑1 GGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAAC < 1:67110/76‑1 GGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAAC > 2:1763793/1‑76 GAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACC > 2:618319/1‑76 ACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGT > 2:1614177/1‑76 ACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTT < 1:1494140/76‑1 CCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCAT < 1:1616140/76‑1 TTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTG < 1:1383483/76‑1 TTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTG < 1:1501401/76‑1 TTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTG < 1:168263/76‑1 TAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGA > 1:1775147/1‑76 TAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGA > 2:1236048/1‑76 TAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGA > 1:1624989/1‑76 TAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGA > 2:749964/1‑76 AGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGAAACGGTCTTCAATTGcc > 2:872179/1‑74 GCCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACC > 2:1051575/1‑76 CCTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCA > 2:1320510/1‑76 CTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCAC > 2:948268/1‑76 CTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCAC > 2:1488773/1‑76 CTGTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCAC < 1:1718666/76‑1 GTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACAT < 2:1434634/76‑1 GTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACAT > 1:1315378/1‑76 GTGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACAT > 2:1259/1‑76 TGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATC < 1:1610765/76‑1 TGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATC > 1:6577/1‑76 TGTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATC > 2:1078076/1‑76 GTAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCG > 1:498734/1‑76 TAATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGA < 2:1188209/76‑1 AATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGAT > 2:1719516/1‑76 ATCTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATA < 1:19861/76‑1 CTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGA < 1:1859390/76‑1 CTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGA < 1:1346058/76‑1 CTCCCTTACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGA < 1:1346080/76‑1 TACACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTC > 2:1390646/1‑76 CACGGGCTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCT < 1:983910/76‑1 CTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAG < 1:145132/76‑1 CTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAG > 2:1024514/1‑76 CTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAG > 2:348319/1‑76 CTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAG < 2:1422598/76‑1 CTTATTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCATCATAG < 1:847662/76‑1 TTATTTTTTTATGCATAAGCCCTCTCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGC > 2:8852/1‑76 TTTTTTTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACG > 1:1533391/1‑76 TTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC > 2:160616/1‑76 CATCCGTTTCGCTGAAAAACATAACCCATAAAATGCTAGCTGTACCAGGAACCACCTCCTTAGCCTGTGTAATCTCCCTTACACGGGCTTATTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2100211‑2100307‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcccttacacgggcttattttttTATGCATAAGCCCTATCTCTGGTAACCGTCTTCCATTGACCACATCGATAGAATCCTCCTTCATAGCACGATGCC > REL606/2122454‑2122528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |