Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	REL606	2031858–2031887	2054816–2054779	22893–22959	17 [16]	[16] 17	[manB]–[cpsG]	[manB],manC,insB‑14,insA‑14,wbbD,wbbC,wzy,wbbB,wbbA,vioB,vioA,wzx,rmlC,rfbA,rfbD,rfbB,galF,wcaM,wcaL,wcaK,wzxC,wcaJ,[cpsG]

CAGTAAGCGAAATCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTTAATAAAGGCGTGTCCGGTT  >  REL606/2031782‑2031880                                                                            |                        aaGTAGGCGAAATCACGGAAATAGTTGTGGGCGCTCATTTCGCCTCCGTAGATGGCGTCTTCCTTGCGCATACGtt                         <  2:367962/75‑1 (MQ=14)   gTAAGCGAAATCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCt                       >  2:1595199/1‑76 (MQ=39)     aaGCGGAATCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCttt                     <  2:72671/76‑1 (MQ=255)     aaGCGAAATCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCttt                     >  1:835314/1‑76 (MQ=39)     aaGCGAAATCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTACTTGCGCATACGTTCttt                     >  2:84361/1‑76 (MQ=255)      aGCGAAATCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTta                    >  2:1358822/1‑76 (MQ=39)      aGCGAAATCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTta                    <  2:239256/76‑1 (MQ=39)      aGCAAAAACACGAAAATAGTTGTGGACGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTta                    <  2:403290/76‑1 (MQ=14)         gAAATCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTtaata                 <  2:1073222/76‑1 (MQ=39)          aaaTCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTtaataa                <  1:431029/76‑1 (MQ=39)          aaaTCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTtaataa                <  2:663729/76‑1 (MQ=39)              cACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTTAATAAAGGc            <  1:730112/76‑1 (MQ=39)                 ggAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTTAATAAAGGCgtg         >  2:742145/1‑76 (MQ=39)                 ggAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTTAATAAAGACgtg         <  2:172551/76‑1 (MQ=255)                    aaTAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTTAATAAAGGCGTGTcc      >  1:1400818/1‑76 (MQ=38)                       aGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTGTTCCTTGCGCATACGTTCATTAATAAAGGCGTGTCCGGt   >  2:1406282/1‑76 (MQ=255)                        gtggtgGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTTAATAAAGGCGTGTCCGGtt  <  2:930847/76‑1 (MQ=31)                                                                            |                        CAGTAAGCGAAATCACGGAAATAGTGGTGGGCGCTCATTTCGCCACCGTAGATGGCGTCTTCCTTGCGCATACGTTCTTTAATAAAGGCGTGTCCGGTT  >  REL606/2031782‑2031880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑