mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 4,574,252 | 0 | T | G | 45.7% | 38.1 / 17.1 | 35 | S5S (TCA→TCC) | hpaX | hypothetical 4‑hydroxyphenylacetate permease |
| * | REL606 | 1,484,105 | 0 | A | G | 45.5% | 33.4 / 12.7 | 33 | G55G (GGA→GGG) | ydcU | predicted spermidine/putrescine transporter subunit |
| * | REL606 | 3,492,082 | 0 | T | G | 40.4% | 75.2 / 17.1 | 52 | V490G (GTG→GGG) | glpD | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding |
| * | REL606 | 2,296,329 | 0 | A | C | 38.3% | 64.9 / 21.1 | 48 | intergenic (‑149/‑66) | inaA/yfaH | hypothetical protein/hypothetical protein |
| * | REL606 | 1,747,903 | 0 | G | T | 37.6% | 145.0 / 90.4 | 94 | A8S (GCA→TCA) | ydiL | hypothetical protein |
| * | REL606 | 3,691,844 | 0 | T | G | 31.9% | 84.1 / 11.7 | 48 | N226T (AAC→ACC) | yiaY | predicted Fe‑containing alcohol dehydrogenase |