| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 2,904,110 | (GTC)4→3 | coding (2297‑2299/3099 nt) | ygfK → | predicted oxidoreductase, Fe‑S subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 2904101 | 2904103 | 3 | 44 [0] | [0] 45 | ygfK | predicted oxidoreductase, Fe‑S subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2904104 = | 0 (0.000) | 41 (0.960) | 29/132 | 0.4 | 100% | coding (2291/3099 nt) | ygfK | predicted oxidoreductase, Fe‑S subunit |
| ? | REL606 | = 2904100 | 0 (0.000) | coding (2287/3099 nt) | ygfK | predicted oxidoreductase, Fe‑S subunit | |||||
CAGTATCCTGCTGTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2904187‑2904104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgacgacCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCATCGAAACGTTCCGGATT < REL606/2904100‑2904028 CAGTATCCTGCTGTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGG < 2:866481/76‑1 AGTATCCTGCTGTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGA > 1:407702/1‑76 GTATCCTGCTGTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGAC > 1:1270272/1‑76 TGCTGTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGAC < 2:1455446/76‑1 GCTGTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACAACGACC > 2:877511/1‑76 TGTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTT > 1:1110441/1‑76 TGTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTT < 1:1228671/76‑1 GTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTT < 2:904417/76‑1 GTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTT < 2:406794/76‑1 GTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTT < 2:1391085/76‑1 GTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTT < 2:1002033/76‑1 TTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTC > 2:302712/1‑76 TTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTC < 2:21294/76‑1 TTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTC > 1:239813/1‑76 TCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCT < 2:791426/76‑1 GGTGATCAGGCTGTCTACAAGCAGTGTTTCTGTTTCATTTGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCG < 2:973010/76‑1 TGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCC > 2:512997/1‑76 GCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGAC < 2:4333/76‑1 CTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACA > 1:1393021/1‑76 CTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACA > 2:1201429/1‑76 CTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACA < 1:1407112/76‑1 TCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAA > 1:1041803/1‑76 TCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAA < 2:723675/76‑1 TCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAA > 1:949301/1‑76 TACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACG > 2:890634/1‑76 CAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCG > 1:1448866/1‑76 CAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCG > 1:1291228/1‑76 AGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCA < 2:783427/76‑1 AGTGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGG > 2:267967/1‑76 TGTTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTT > 2:865842/1‑76 GTTACTGTTTCATTGGTTTCAACCGGACGACGACGTTTCTTATCCGGTTCGCCAAGCGTCATACCGCGCGAGGTTg > 1:94555/1‑75 TTACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAA > 2:386040/1‑76 TACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAG < 1:1211226/76‑1 TACTGTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAG < 1:1484160/76‑1 tTTTCATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGC < 2:543783/75‑1 ATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCA < 2:1214/76‑1 ATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCA < 2:475325/76‑1 ATTGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCA < 2:7514/76‑1 TGGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGC > 1:749055/1‑76 GGTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCA < 1:1258190/76‑1 GTTTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCAT < 1:377040/76‑1 TTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCATCG < 2:139832/76‑1 TTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCATCG < 2:765567/76‑1 TTCAACCGGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCATCG < 2:342840/76‑1 GGACGACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCATCGAAACGTT > 1:193500/1‑76 GACGACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCATCGAAACGTTCCGG > 1:407873/1‑76 GACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCATCGAAACGTTCCGGATT < 2:766444/76‑1 GACCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCATCGAAACGTTCCGGATT < 1:270797/76‑1 CAGTATCCTGCTGTTCACCAATGGCGGTGATCAGGCTGTCTACAAGCAGTGTTACTGTTTCATTGGTTTCAACCGGACGACGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2904187‑2904104‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgacgacCTTTCTCATCCGGTTCGCCAAGCGACATAACGCGCAAGGTTAAGGTGCCATCAGCATCGAAACGTTCCGGATT < REL606/2904100‑2904028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |