| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 2,904,110 | (GTC)4→3 | coding (2297‑2299/3099 nt) | ygfK → | predicted oxidoreductase, Fe‑S subunit |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 2904101 | 2904103 | 3 | 44 [0] | [0] 45 | ygfK | predicted oxidoreductase, Fe‑S subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2904104 = | 0 (0.000) | 41 (0.960) | 29/132 | 0.4 | 100% | coding (2291/3099 nt) | ygfK | predicted oxidoreductase, Fe‑S subunit |
| ? | REL606 | = 2904100 | 0 (0.000) | coding (2287/3099 nt) | ygfK | predicted oxidoreductase, Fe‑S subunit | |||||
CCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGGTCGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAACAGCA > REL606/2904031‑2904179 | aatccggaacgtttcgatgctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaaggtc < 2:766444‑M1/3‑1 (MQ=255)aatccggaacgtttcgatgctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaaggtc < 1:270797‑M1/3‑1 (MQ=255) ccggaacgtttcgatgctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaaggtcgtc > 1:407873‑M1/71‑76 (MQ=255) aacgtttcgatgctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTcc > 1:193500‑M1/67‑76 (MQ=255) cgatgctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGaa < 2:765567‑M1/17‑1 (MQ=255) cgatgctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGaa < 2:139832‑M1/17‑1 (MQ=255) cgatgctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGaa < 2:342840‑M1/17‑1 (MQ=255) atgctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAAc < 1:377040‑M1/19‑1 (MQ=255) tgctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAAcc < 1:1258190‑M1/20‑1 (MQ=255) gctgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCa > 1:749055‑M1/56‑76 (MQ=255) tgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAAt < 2:475325‑M1/23‑1 (MQ=255) tgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAAt < 2:7514‑M1/23‑1 (MQ=255) tgatggcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAAt < 2:1214‑M1/23‑1 (MQ=255) gcaccttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATgaaaa < 2:543783‑M1/28‑2 (MQ=255) cttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTa < 1:1484160‑M1/32‑1 (MQ=255) cttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTa < 1:1211226‑M1/32‑1 (MQ=255) ttaaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTaa > 2:386040‑M1/44‑76 (MQ=255) caacctcgcgcggtatgacgcttggcgaaccggataagaaacGTCGTCGTCCGGTTGAAACCAATGAAACAGTAac > 1:94555‑M1/43‑76 (MQ=255) aaccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAaca > 2:865842‑M1/42‑76 (MQ=255) ccttgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACt > 2:267967‑M1/40‑76 (MQ=255) tgcgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCt < 2:783427‑M1/40‑1 (MQ=255) cgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTg > 1:1448866‑M1/35‑76 (MQ=255) cgcgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTg > 1:1291228‑M1/35‑76 (MQ=255) cgttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTa > 2:890634‑M1/33‑76 (MQ=255) ttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGa < 2:723675‑M1/46‑1 (MQ=255) ttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGa > 1:1041803‑M1/31‑76 (MQ=255) ttatgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGa > 1:949301‑M1/31‑76 (MQ=255) tgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAg > 2:1201429‑M1/28‑76 (MQ=255) tgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAg < 1:1407112‑M1/49‑1 (MQ=255) tgtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAg > 1:1393021‑M1/28‑76 (MQ=255) gtcgcttggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGc < 2:4333‑M1/50‑1 (MQ=255) ggcgaaccggatgagaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCa > 2:512997‑M1/20‑76 (MQ=255) cgaaccggatgagaaagGTCGTCGTCCGGTTGAAACAAATGAAACAGAAACACTGCTTGTAGACAGCCTGATCAcc < 2:973010‑M1/59‑1 (MQ=255) agaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGa < 2:791426‑M1/70‑1 (MQ=255) gaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGaa > 2:302712‑M1/6‑76 (MQ=255) gaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGaa < 2:21294‑M1/71‑1 (MQ=255) gaaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGaa > 1:239813‑M1/6‑76 (MQ=255) aaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAAc < 2:406794‑M1/72‑1 (MQ=255) aaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAAc < 2:1391085‑M1/72‑1 (MQ=255) aaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAAc < 2:1002033‑M1/72‑1 (MQ=255) aaagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAAc < 2:904417‑M1/72‑1 (MQ=255) aagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAAca < 1:1228671‑M1/73‑1 (MQ=255) aagGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAAca > 1:1110441‑M1/4‑76 (MQ=255) gGTCGTTGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAAcagc > 2:877511‑M1/2‑76 (MQ=255) GTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAAcagca < 2:1455446‑M1/76‑1 (MQ=255) | CCGGAACGTTTCGATGCTGATGGCACCTTAACCTTGCGCGTTATGTCGCTTGGCGAACCGGATGAGAAAGGTCGTCGTCGTCCGGTTGAAACCAATGAAACAGTAACACTGCTTGTAGACAGCCTGATCACCGCCATTGGTGAACAGCA > REL606/2904031‑2904179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |